Protein–RNA interactions for Protein: Q60857

Slc6a4, Sodium-dependent serotonin transporter, mousemouse

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a4Q60857 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC20.2■□□□□ 0.82
Slc6a4Q60857 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Slc6a4Q60857 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
Slc6a4Q60857 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Slc6a4Q60857 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC20.19■□□□□ 0.82
Slc6a4Q60857 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
Slc6a4Q60857 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Slc6a4Q60857 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC20.19■□□□□ 0.82
Slc6a4Q60857 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Slc6a4Q60857 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Slc6a4Q60857 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Slc6a4Q60857 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Slc6a4Q60857 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Slc6a4Q60857 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
Slc6a4Q60857 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Slc6a4Q60857 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Slc6a4Q60857 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Slc6a4Q60857 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
Slc6a4Q60857 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC20.18■□□□□ 0.82
Slc6a4Q60857 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Slc6a4Q60857 Gm26571-201ENSMUST00000181399 666 ntBASIC20.18■□□□□ 0.82
Slc6a4Q60857 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Slc6a4Q60857 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Slc6a4Q60857 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Slc6a4Q60857 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Slc6a4Q60857 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Slc6a4Q60857 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
Slc6a4Q60857 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC20.17■□□□□ 0.82
Slc6a4Q60857 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC20.17■□□□□ 0.82
Slc6a4Q60857 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Slc6a4Q60857 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Slc6a4Q60857 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Slc6a4Q60857 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC20.17■□□□□ 0.82
Slc6a4Q60857 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC20.17■□□□□ 0.82
Slc6a4Q60857 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Slc6a4Q60857 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC20.16■□□□□ 0.82
Slc6a4Q60857 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Slc6a4Q60857 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Slc6a4Q60857 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Slc6a4Q60857 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Slc6a4Q60857 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Slc6a4Q60857 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Slc6a4Q60857 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC20.16■□□□□ 0.82
Slc6a4Q60857 Gm43006-201ENSMUST00000197702 1602 ntBASIC20.16■□□□□ 0.82
Slc6a4Q60857 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Slc6a4Q60857 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Slc6a4Q60857 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Slc6a4Q60857 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Slc6a4Q60857 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Slc6a4Q60857 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC20.15■□□□□ 0.82
Slc6a4Q60857 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC20.15■□□□□ 0.82
Slc6a4Q60857 Gm42642-201ENSMUST00000200683 355 ntBASIC20.15■□□□□ 0.82
Slc6a4Q60857 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Slc6a4Q60857 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Slc6a4Q60857 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Slc6a4Q60857 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Slc6a4Q60857 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
Slc6a4Q60857 Gm43909-201ENSMUST00000203443 1876 ntBASIC20.14■□□□□ 0.81
Slc6a4Q60857 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Slc6a4Q60857 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Slc6a4Q60857 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC20.14■□□□□ 0.81
Slc6a4Q60857 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Slc6a4Q60857 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC20.14■□□□□ 0.81
Slc6a4Q60857 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC20.14■□□□□ 0.81
Slc6a4Q60857 Gm27801-201ENSMUST00000184174 223 ntBASIC20.14■□□□□ 0.81
Slc6a4Q60857 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Slc6a4Q60857 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Slc6a4Q60857 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Slc6a4Q60857 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Slc6a4Q60857 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Slc6a4Q60857 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Slc6a4Q60857 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC20.14■□□□□ 0.81
Slc6a4Q60857 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Slc6a4Q60857 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Slc6a4Q60857 Gm42911-201ENSMUST00000199360 1630 ntBASIC20.13■□□□□ 0.81
Slc6a4Q60857 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Slc6a4Q60857 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC20.13■□□□□ 0.81
Slc6a4Q60857 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Slc6a4Q60857 AC124392.1-201ENSMUST00000225172 5324 ntBASIC20.13■□□□□ 0.81
Slc6a4Q60857 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Slc6a4Q60857 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
Slc6a4Q60857 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Slc6a4Q60857 AA386476-201ENSMUST00000098781 1665 ntBASIC20.13■□□□□ 0.81
Slc6a4Q60857 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Slc6a4Q60857 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Slc6a4Q60857 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC20.12■□□□□ 0.81
Slc6a4Q60857 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Slc6a4Q60857 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Slc6a4Q60857 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
Slc6a4Q60857 Gm14281-201ENSMUST00000121700 1294 ntBASIC20.12■□□□□ 0.81
Slc6a4Q60857 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Slc6a4Q60857 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Slc6a4Q60857 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Slc6a4Q60857 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Slc6a4Q60857 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Slc6a4Q60857 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Slc6a4Q60857 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
Slc6a4Q60857 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Slc6a4Q60857 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC20.11■□□□□ 0.81
Slc6a4Q60857 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Retrieved 100 of 76,532 protein–RNA pairs in 19.8 ms