Protein–RNA interactions for Protein: Q60847

Col12a1, Collagen alpha-1(XII) chain, mousemouse

Predictions only

Length 3,120 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col12a1Q60847 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Col12a1Q60847 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
Col12a1Q60847 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Col12a1Q60847 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Col12a1Q60847 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Col12a1Q60847 Gm37563-201ENSMUST00000192580 1513 ntBASIC19.79■□□□□ 0.76
Col12a1Q60847 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Col12a1Q60847 Gm6576-201ENSMUST00000169678 883 ntBASIC19.79■□□□□ 0.76
Col12a1Q60847 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Col12a1Q60847 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC19.79■□□□□ 0.76
Col12a1Q60847 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Col12a1Q60847 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC19.78■□□□□ 0.76
Col12a1Q60847 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Col12a1Q60847 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Col12a1Q60847 AC153962.1-201ENSMUST00000218530 1948 ntBASIC19.78■□□□□ 0.76
Col12a1Q60847 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
Col12a1Q60847 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Col12a1Q60847 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Col12a1Q60847 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Col12a1Q60847 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC19.78■□□□□ 0.76
Col12a1Q60847 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Col12a1Q60847 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Col12a1Q60847 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Col12a1Q60847 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Col12a1Q60847 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC19.78■□□□□ 0.76
Col12a1Q60847 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Col12a1Q60847 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC19.77■□□□□ 0.76
Col12a1Q60847 CT030146.1-201ENSMUST00000220919 217 ntBASIC19.77■□□□□ 0.76
Col12a1Q60847 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Col12a1Q60847 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC19.77■□□□□ 0.76
Col12a1Q60847 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC19.77■□□□□ 0.76
Col12a1Q60847 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC19.77■□□□□ 0.76
Col12a1Q60847 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Col12a1Q60847 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Col12a1Q60847 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
Col12a1Q60847 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC19.77■□□□□ 0.75
Col12a1Q60847 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC19.77■□□□□ 0.75
Col12a1Q60847 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Col12a1Q60847 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Col12a1Q60847 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
Col12a1Q60847 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
Col12a1Q60847 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
Col12a1Q60847 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Col12a1Q60847 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Col12a1Q60847 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC19.76■□□□□ 0.75
Col12a1Q60847 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Col12a1Q60847 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC19.76■□□□□ 0.75
Col12a1Q60847 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
Col12a1Q60847 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Col12a1Q60847 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Col12a1Q60847 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC19.75■□□□□ 0.75
Col12a1Q60847 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
Col12a1Q60847 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC19.75■□□□□ 0.75
Col12a1Q60847 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC19.75■□□□□ 0.75
Col12a1Q60847 Gm13534-201ENSMUST00000121169 513 ntBASIC19.75■□□□□ 0.75
Col12a1Q60847 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC19.75■□□□□ 0.75
Col12a1Q60847 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC19.75■□□□□ 0.75
Col12a1Q60847 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Col12a1Q60847 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Col12a1Q60847 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Col12a1Q60847 Gm44672-201ENSMUST00000206944 1098 ntBASIC19.74■□□□□ 0.75
Col12a1Q60847 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Col12a1Q60847 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Col12a1Q60847 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Col12a1Q60847 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Col12a1Q60847 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Col12a1Q60847 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC19.74■□□□□ 0.75
Col12a1Q60847 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC19.74■□□□□ 0.75
Col12a1Q60847 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Col12a1Q60847 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Col12a1Q60847 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Col12a1Q60847 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
Col12a1Q60847 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
Col12a1Q60847 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Col12a1Q60847 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Col12a1Q60847 AC164883.3-201ENSMUST00000227396 1774 ntBASIC19.73■□□□□ 0.75
Col12a1Q60847 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Col12a1Q60847 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Col12a1Q60847 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
Col12a1Q60847 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Col12a1Q60847 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Col12a1Q60847 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Col12a1Q60847 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Col12a1Q60847 Gm10571-201ENSMUST00000097869 1638 ntBASIC19.72■□□□□ 0.75
Col12a1Q60847 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
Col12a1Q60847 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Col12a1Q60847 Gm42418-201ENSMUST00000182010 1831 ntBASIC19.72■□□□□ 0.75
Col12a1Q60847 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Col12a1Q60847 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Col12a1Q60847 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Col12a1Q60847 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Col12a1Q60847 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Col12a1Q60847 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
Col12a1Q60847 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Col12a1Q60847 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Col12a1Q60847 Gm11643-201ENSMUST00000119578 864 ntBASIC19.71■□□□□ 0.75
Col12a1Q60847 Arhgef33-211ENSMUST00000225658 473 ntBASIC19.71■□□□□ 0.75
Col12a1Q60847 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Col12a1Q60847 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Col12a1Q60847 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
Retrieved 100 of 76,532 protein–RNA pairs in 15.1 ms