Protein–RNA interactions for Protein: Q60769

Tnfaip3, Tumor necrosis factor alpha-induced protein 3, mousemouse

Predictions only

Length 775 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfaip3Q60769 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Tnfaip3Q60769 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
Tnfaip3Q60769 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Tnfaip3Q60769 Gm11421-201ENSMUST00000122124 294 ntBASIC18.45■□□□□ 0.54
Tnfaip3Q60769 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Tnfaip3Q60769 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
Tnfaip3Q60769 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
Tnfaip3Q60769 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Tnfaip3Q60769 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Tnfaip3Q60769 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC18.45■□□□□ 0.54
Tnfaip3Q60769 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC18.45■□□□□ 0.54
Tnfaip3Q60769 Snhg20-203ENSMUST00000182811 2153 ntBASIC18.45■□□□□ 0.54
Tnfaip3Q60769 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Tnfaip3Q60769 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Tnfaip3Q60769 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Tnfaip3Q60769 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Tnfaip3Q60769 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC18.44■□□□□ 0.54
Tnfaip3Q60769 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Tnfaip3Q60769 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Tnfaip3Q60769 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Tnfaip3Q60769 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Tnfaip3Q60769 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
Tnfaip3Q60769 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
Tnfaip3Q60769 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Tnfaip3Q60769 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Tnfaip3Q60769 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Tnfaip3Q60769 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC18.43■□□□□ 0.54
Tnfaip3Q60769 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Tnfaip3Q60769 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Tnfaip3Q60769 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Tnfaip3Q60769 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Tnfaip3Q60769 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC18.43■□□□□ 0.54
Tnfaip3Q60769 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Tnfaip3Q60769 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
Tnfaip3Q60769 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Tnfaip3Q60769 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
Tnfaip3Q60769 AC152827.1-201ENSMUST00000221143 2189 ntBASIC18.42■□□□□ 0.54
Tnfaip3Q60769 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Tnfaip3Q60769 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Tnfaip3Q60769 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Tnfaip3Q60769 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Tnfaip3Q60769 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Tnfaip3Q60769 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Tnfaip3Q60769 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Tnfaip3Q60769 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC18.42■□□□□ 0.54
Tnfaip3Q60769 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Tnfaip3Q60769 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC18.42■□□□□ 0.54
Tnfaip3Q60769 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Tnfaip3Q60769 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Tnfaip3Q60769 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Tnfaip3Q60769 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
Tnfaip3Q60769 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Tnfaip3Q60769 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
Tnfaip3Q60769 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Tnfaip3Q60769 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
Tnfaip3Q60769 Gm37035-201ENSMUST00000194809 2148 ntBASIC18.41■□□□□ 0.54
Tnfaip3Q60769 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC18.41■□□□□ 0.54
Tnfaip3Q60769 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Tnfaip3Q60769 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Tnfaip3Q60769 Gm34220-201ENSMUST00000223001 2709 ntBASIC18.41■□□□□ 0.54
Tnfaip3Q60769 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Tnfaip3Q60769 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Tnfaip3Q60769 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC18.41■□□□□ 0.54
Tnfaip3Q60769 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Tnfaip3Q60769 AC137127.1-201ENSMUST00000213466 1078 ntBASIC18.41■□□□□ 0.54
Tnfaip3Q60769 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Tnfaip3Q60769 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Tnfaip3Q60769 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Tnfaip3Q60769 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
Tnfaip3Q60769 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC18.4■□□□□ 0.54
Tnfaip3Q60769 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Tnfaip3Q60769 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
Tnfaip3Q60769 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
Tnfaip3Q60769 Gm18284-201ENSMUST00000172604 624 ntBASIC18.4■□□□□ 0.54
Tnfaip3Q60769 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC18.4■□□□□ 0.54
Tnfaip3Q60769 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC18.4■□□□□ 0.54
Tnfaip3Q60769 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Tnfaip3Q60769 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Tnfaip3Q60769 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
Tnfaip3Q60769 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
Tnfaip3Q60769 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Tnfaip3Q60769 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
Tnfaip3Q60769 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC18.39■□□□□ 0.54
Tnfaip3Q60769 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
Tnfaip3Q60769 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Tnfaip3Q60769 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Tnfaip3Q60769 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC18.39■□□□□ 0.53
Tnfaip3Q60769 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Tnfaip3Q60769 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Tnfaip3Q60769 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Tnfaip3Q60769 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Tnfaip3Q60769 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Tnfaip3Q60769 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Tnfaip3Q60769 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Tnfaip3Q60769 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
Tnfaip3Q60769 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
Tnfaip3Q60769 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Tnfaip3Q60769 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC18.38■□□□□ 0.53
Tnfaip3Q60769 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC18.38■□□□□ 0.53
Tnfaip3Q60769 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 17.5 ms