Protein–RNA interactions for Protein: Q5SZ99

Trim38, Tripartite motif-containing 38, mousemouse

Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim38Q5SZ99 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Trim38Q5SZ99 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Trim38Q5SZ99 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Trim38Q5SZ99 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC20.34■□□□□ 0.85
Trim38Q5SZ99 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Trim38Q5SZ99 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
Trim38Q5SZ99 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Trim38Q5SZ99 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Trim38Q5SZ99 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Trim38Q5SZ99 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Trim38Q5SZ99 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC20.34■□□□□ 0.85
Trim38Q5SZ99 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Trim38Q5SZ99 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.85
Trim38Q5SZ99 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC20.33■□□□□ 0.85
Trim38Q5SZ99 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC20.33■□□□□ 0.85
Trim38Q5SZ99 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
Trim38Q5SZ99 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC20.33■□□□□ 0.84
Trim38Q5SZ99 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.84
Trim38Q5SZ99 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Trim38Q5SZ99 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC20.32■□□□□ 0.84
Trim38Q5SZ99 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Trim38Q5SZ99 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Trim38Q5SZ99 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC20.32■□□□□ 0.84
Trim38Q5SZ99 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Trim38Q5SZ99 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Trim38Q5SZ99 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Trim38Q5SZ99 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Trim38Q5SZ99 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
Trim38Q5SZ99 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Trim38Q5SZ99 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Trim38Q5SZ99 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC20.31■□□□□ 0.84
Trim38Q5SZ99 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC20.31■□□□□ 0.84
Trim38Q5SZ99 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
Trim38Q5SZ99 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
Trim38Q5SZ99 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC20.3■□□□□ 0.84
Trim38Q5SZ99 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC20.3■□□□□ 0.84
Trim38Q5SZ99 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
Trim38Q5SZ99 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Trim38Q5SZ99 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Trim38Q5SZ99 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Trim38Q5SZ99 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Trim38Q5SZ99 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Trim38Q5SZ99 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Trim38Q5SZ99 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Trim38Q5SZ99 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Trim38Q5SZ99 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC20.3■□□□□ 0.84
Trim38Q5SZ99 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Trim38Q5SZ99 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Trim38Q5SZ99 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
Trim38Q5SZ99 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC20.3■□□□□ 0.84
Trim38Q5SZ99 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Trim38Q5SZ99 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Trim38Q5SZ99 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Trim38Q5SZ99 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Trim38Q5SZ99 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC20.29■□□□□ 0.84
Trim38Q5SZ99 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
Trim38Q5SZ99 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Trim38Q5SZ99 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Trim38Q5SZ99 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Trim38Q5SZ99 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC20.29■□□□□ 0.84
Trim38Q5SZ99 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC20.29■□□□□ 0.84
Trim38Q5SZ99 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Trim38Q5SZ99 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Trim38Q5SZ99 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Trim38Q5SZ99 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC20.29■□□□□ 0.84
Trim38Q5SZ99 AA386476-201ENSMUST00000098781 1665 ntBASIC20.29■□□□□ 0.84
Trim38Q5SZ99 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
Trim38Q5SZ99 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC20.28■□□□□ 0.84
Trim38Q5SZ99 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Trim38Q5SZ99 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Trim38Q5SZ99 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Trim38Q5SZ99 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
Trim38Q5SZ99 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Trim38Q5SZ99 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
Trim38Q5SZ99 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Trim38Q5SZ99 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
Trim38Q5SZ99 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Trim38Q5SZ99 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Trim38Q5SZ99 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Trim38Q5SZ99 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Trim38Q5SZ99 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Trim38Q5SZ99 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
Trim38Q5SZ99 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC20.27■□□□□ 0.84
Trim38Q5SZ99 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Trim38Q5SZ99 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Trim38Q5SZ99 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Trim38Q5SZ99 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Trim38Q5SZ99 Gm10209-201ENSMUST00000203397 1607 ntBASIC20.27■□□□□ 0.83
Trim38Q5SZ99 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Trim38Q5SZ99 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Trim38Q5SZ99 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Trim38Q5SZ99 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Trim38Q5SZ99 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Trim38Q5SZ99 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Trim38Q5SZ99 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC20.26■□□□□ 0.83
Trim38Q5SZ99 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Trim38Q5SZ99 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Trim38Q5SZ99 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Trim38Q5SZ99 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Trim38Q5SZ99 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 31.1 ms