Protein–RNA interactions for Protein: Q5R1F6

Trav5d-4, T cell receptor alpha variable 5D-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5d-4Q5R1F6 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trav5d-4Q5R1F6 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Trav5d-4Q5R1F6 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Trav5d-4Q5R1F6 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trav5d-4Q5R1F6 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Trav5d-4Q5R1F6 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
Trav5d-4Q5R1F6 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC16.87■□□□□ 0.29
Trav5d-4Q5R1F6 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC16.87■□□□□ 0.29
Trav5d-4Q5R1F6 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC16.87■□□□□ 0.29
Trav5d-4Q5R1F6 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC16.87■□□□□ 0.29
Trav5d-4Q5R1F6 Golgb1-201ENSMUST00000023534 498 ntBASIC16.87■□□□□ 0.29
Trav5d-4Q5R1F6 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trav5d-4Q5R1F6 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trav5d-4Q5R1F6 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trav5d-4Q5R1F6 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trav5d-4Q5R1F6 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trav5d-4Q5R1F6 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trav5d-4Q5R1F6 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trav5d-4Q5R1F6 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trav5d-4Q5R1F6 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
Trav5d-4Q5R1F6 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trav5d-4Q5R1F6 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Trav5d-4Q5R1F6 Gm43759-201ENSMUST00000196925 1261 ntBASIC16.86■□□□□ 0.29
Trav5d-4Q5R1F6 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trav5d-4Q5R1F6 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trav5d-4Q5R1F6 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
Trav5d-4Q5R1F6 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC16.86■□□□□ 0.29
Trav5d-4Q5R1F6 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trav5d-4Q5R1F6 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Trav5d-4Q5R1F6 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Trav5d-4Q5R1F6 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
Trav5d-4Q5R1F6 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
Trav5d-4Q5R1F6 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Trav5d-4Q5R1F6 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Trav5d-4Q5R1F6 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Trav5d-4Q5R1F6 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Trav5d-4Q5R1F6 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Trav5d-4Q5R1F6 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC16.85■□□□□ 0.29
Trav5d-4Q5R1F6 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Trav5d-4Q5R1F6 Gm27045-201ENSMUST00000182145 1402 ntBASIC16.85■□□□□ 0.29
Trav5d-4Q5R1F6 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
Trav5d-4Q5R1F6 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
Trav5d-4Q5R1F6 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
Trav5d-4Q5R1F6 Gm43545-201ENSMUST00000196765 2779 ntBASIC16.84■□□□□ 0.29
Trav5d-4Q5R1F6 Gm12922-201ENSMUST00000120626 809 ntBASIC16.84■□□□□ 0.29
Trav5d-4Q5R1F6 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC16.84■□□□□ 0.29
Trav5d-4Q5R1F6 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC16.84■□□□□ 0.29
Trav5d-4Q5R1F6 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Trav5d-4Q5R1F6 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC16.84■□□□□ 0.29
Trav5d-4Q5R1F6 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC16.84■□□□□ 0.29
Trav5d-4Q5R1F6 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trav5d-4Q5R1F6 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC16.83■□□□□ 0.29
Trav5d-4Q5R1F6 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Trav5d-4Q5R1F6 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
Trav5d-4Q5R1F6 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
Trav5d-4Q5R1F6 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Trav5d-4Q5R1F6 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Trav5d-4Q5R1F6 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Trav5d-4Q5R1F6 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Trav5d-4Q5R1F6 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Trav5d-4Q5R1F6 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Trav5d-4Q5R1F6 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
Trav5d-4Q5R1F6 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
Trav5d-4Q5R1F6 Iqck-206ENSMUST00000208658 2891 ntBASIC16.83■□□□□ 0.28
Trav5d-4Q5R1F6 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Trav5d-4Q5R1F6 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC16.82■□□□□ 0.28
Trav5d-4Q5R1F6 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trav5d-4Q5R1F6 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC16.82■□□□□ 0.28
Trav5d-4Q5R1F6 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC16.82■□□□□ 0.28
Trav5d-4Q5R1F6 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Trav5d-4Q5R1F6 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trav5d-4Q5R1F6 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trav5d-4Q5R1F6 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
Trav5d-4Q5R1F6 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trav5d-4Q5R1F6 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Trav5d-4Q5R1F6 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC16.81■□□□□ 0.28
Trav5d-4Q5R1F6 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
Trav5d-4Q5R1F6 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
Trav5d-4Q5R1F6 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trav5d-4Q5R1F6 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trav5d-4Q5R1F6 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trav5d-4Q5R1F6 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Trav5d-4Q5R1F6 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC16.8■□□□□ 0.28
Trav5d-4Q5R1F6 Gm9207-201ENSMUST00000198773 1115 ntBASIC16.8■□□□□ 0.28
Trav5d-4Q5R1F6 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trav5d-4Q5R1F6 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trav5d-4Q5R1F6 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trav5d-4Q5R1F6 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trav5d-4Q5R1F6 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trav5d-4Q5R1F6 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Trav5d-4Q5R1F6 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Trav5d-4Q5R1F6 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC16.79■□□□□ 0.28
Trav5d-4Q5R1F6 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trav5d-4Q5R1F6 Gm9847-201ENSMUST00000052528 599 ntBASIC16.79■□□□□ 0.28
Trav5d-4Q5R1F6 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trav5d-4Q5R1F6 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trav5d-4Q5R1F6 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
Trav5d-4Q5R1F6 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trav5d-4Q5R1F6 Gm6085-201ENSMUST00000182774 1470 ntBASIC16.79■□□□□ 0.28
Trav5d-4Q5R1F6 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 56 ms