Protein–RNA interactions for Protein: Q5NCP0

Rnf43, E3 ubiquitin-protein ligase RNF43, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf43Q5NCP0 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Rnf43Q5NCP0 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC20.04■□□□□ 0.8
Rnf43Q5NCP0 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
Rnf43Q5NCP0 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Rnf43Q5NCP0 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC20.04■□□□□ 0.8
Rnf43Q5NCP0 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Rnf43Q5NCP0 AC124392.1-201ENSMUST00000225172 5324 ntBASIC20.04■□□□□ 0.8
Rnf43Q5NCP0 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Rnf43Q5NCP0 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
Rnf43Q5NCP0 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Rnf43Q5NCP0 Gm12441-201ENSMUST00000121806 588 ntBASIC20.03■□□□□ 0.8
Rnf43Q5NCP0 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC20.03■□□□□ 0.8
Rnf43Q5NCP0 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC20.03■□□□□ 0.8
Rnf43Q5NCP0 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Rnf43Q5NCP0 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Rnf43Q5NCP0 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Rnf43Q5NCP0 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Rnf43Q5NCP0 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Rnf43Q5NCP0 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Rnf43Q5NCP0 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC20.02■□□□□ 0.8
Rnf43Q5NCP0 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Rnf43Q5NCP0 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Rnf43Q5NCP0 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Rnf43Q5NCP0 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Rnf43Q5NCP0 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Rnf43Q5NCP0 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC20.01■□□□□ 0.79
Rnf43Q5NCP0 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC20.01■□□□□ 0.79
Rnf43Q5NCP0 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Rnf43Q5NCP0 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Rnf43Q5NCP0 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Rnf43Q5NCP0 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Rnf43Q5NCP0 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Rnf43Q5NCP0 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Rnf43Q5NCP0 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC20■□□□□ 0.79
Rnf43Q5NCP0 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC20■□□□□ 0.79
Rnf43Q5NCP0 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Rnf43Q5NCP0 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Rnf43Q5NCP0 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Rnf43Q5NCP0 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC20■□□□□ 0.79
Rnf43Q5NCP0 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC20■□□□□ 0.79
Rnf43Q5NCP0 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Rnf43Q5NCP0 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC20■□□□□ 0.79
Rnf43Q5NCP0 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC20■□□□□ 0.79
Rnf43Q5NCP0 Gm42555-201ENSMUST00000199304 1039 ntBASIC20■□□□□ 0.79
Rnf43Q5NCP0 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
Rnf43Q5NCP0 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC19.99■□□□□ 0.79
Rnf43Q5NCP0 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Rnf43Q5NCP0 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Rnf43Q5NCP0 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Rnf43Q5NCP0 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
Rnf43Q5NCP0 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Rnf43Q5NCP0 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Rnf43Q5NCP0 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Rnf43Q5NCP0 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Rnf43Q5NCP0 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC19.98■□□□□ 0.79
Rnf43Q5NCP0 Mir5133-201ENSMUST00000174955 77 ntBASIC19.98■□□□□ 0.79
Rnf43Q5NCP0 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC19.98■□□□□ 0.79
Rnf43Q5NCP0 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC19.98■□□□□ 0.79
Rnf43Q5NCP0 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Rnf43Q5NCP0 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Rnf43Q5NCP0 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Rnf43Q5NCP0 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Rnf43Q5NCP0 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Rnf43Q5NCP0 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Rnf43Q5NCP0 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC19.98■□□□□ 0.79
Rnf43Q5NCP0 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Rnf43Q5NCP0 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Rnf43Q5NCP0 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Rnf43Q5NCP0 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC19.97■□□□□ 0.79
Rnf43Q5NCP0 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Rnf43Q5NCP0 Nespas-201ENSMUST00000143738 1083 ntBASIC19.97■□□□□ 0.79
Rnf43Q5NCP0 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC19.97■□□□□ 0.79
Rnf43Q5NCP0 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Rnf43Q5NCP0 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
Rnf43Q5NCP0 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Rnf43Q5NCP0 AC122428.2-201ENSMUST00000216321 1832 ntBASIC19.97■□□□□ 0.79
Rnf43Q5NCP0 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC19.97■□□□□ 0.79
Rnf43Q5NCP0 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Rnf43Q5NCP0 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Rnf43Q5NCP0 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Rnf43Q5NCP0 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
Rnf43Q5NCP0 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC19.96■□□□□ 0.79
Rnf43Q5NCP0 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC19.96■□□□□ 0.79
Rnf43Q5NCP0 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC19.96■□□□□ 0.79
Rnf43Q5NCP0 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Rnf43Q5NCP0 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Rnf43Q5NCP0 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Rnf43Q5NCP0 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Rnf43Q5NCP0 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Rnf43Q5NCP0 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Rnf43Q5NCP0 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Rnf43Q5NCP0 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Rnf43Q5NCP0 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC19.95■□□□□ 0.78
Rnf43Q5NCP0 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Rnf43Q5NCP0 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Rnf43Q5NCP0 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Rnf43Q5NCP0 Gm4968-201ENSMUST00000071458 858 ntBASIC19.95■□□□□ 0.78
Rnf43Q5NCP0 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Rnf43Q5NCP0 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Rnf43Q5NCP0 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Retrieved 100 of 76,532 protein–RNA pairs in 47.5 ms