Protein–RNA interactions for Protein: Q5H8C4

Vps13a, Vacuolar protein sorting-associated protein 13A, mousemouse

Predictions only

Length 3,166 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps13aQ5H8C4 Gm6420-201ENSMUST00000193885 723 ntBASIC19.83■□□□□ 0.77
Vps13aQ5H8C4 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC19.83■□□□□ 0.77
Vps13aQ5H8C4 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Vps13aQ5H8C4 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Vps13aQ5H8C4 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Vps13aQ5H8C4 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC19.83■□□□□ 0.76
Vps13aQ5H8C4 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Vps13aQ5H8C4 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Vps13aQ5H8C4 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Vps13aQ5H8C4 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC19.83■□□□□ 0.76
Vps13aQ5H8C4 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Vps13aQ5H8C4 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Vps13aQ5H8C4 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Vps13aQ5H8C4 AL672049.1-201ENSMUST00000197943 91 ntBASIC19.82■□□□□ 0.76
Vps13aQ5H8C4 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Vps13aQ5H8C4 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
Vps13aQ5H8C4 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Vps13aQ5H8C4 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC19.82■□□□□ 0.76
Vps13aQ5H8C4 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Vps13aQ5H8C4 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Vps13aQ5H8C4 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Vps13aQ5H8C4 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
Vps13aQ5H8C4 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC19.81■□□□□ 0.76
Vps13aQ5H8C4 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Vps13aQ5H8C4 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
Vps13aQ5H8C4 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Vps13aQ5H8C4 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Vps13aQ5H8C4 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Vps13aQ5H8C4 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Vps13aQ5H8C4 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Vps13aQ5H8C4 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Vps13aQ5H8C4 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Vps13aQ5H8C4 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC19.8■□□□□ 0.76
Vps13aQ5H8C4 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
Vps13aQ5H8C4 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Vps13aQ5H8C4 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Vps13aQ5H8C4 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Vps13aQ5H8C4 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Vps13aQ5H8C4 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Vps13aQ5H8C4 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Vps13aQ5H8C4 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC19.79■□□□□ 0.76
Vps13aQ5H8C4 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Vps13aQ5H8C4 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC19.79■□□□□ 0.76
Vps13aQ5H8C4 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Vps13aQ5H8C4 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC19.78■□□□□ 0.76
Vps13aQ5H8C4 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Vps13aQ5H8C4 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Vps13aQ5H8C4 Gm37563-201ENSMUST00000192580 1513 ntBASIC19.78■□□□□ 0.76
Vps13aQ5H8C4 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
Vps13aQ5H8C4 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Vps13aQ5H8C4 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Vps13aQ5H8C4 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Vps13aQ5H8C4 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Vps13aQ5H8C4 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Vps13aQ5H8C4 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Vps13aQ5H8C4 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Vps13aQ5H8C4 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Vps13aQ5H8C4 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC19.77■□□□□ 0.76
Vps13aQ5H8C4 Gm6211-202ENSMUST00000167849 925 ntBASIC19.77■□□□□ 0.76
Vps13aQ5H8C4 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Vps13aQ5H8C4 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Vps13aQ5H8C4 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC19.77■□□□□ 0.76
Vps13aQ5H8C4 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
Vps13aQ5H8C4 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC19.77■□□□□ 0.75
Vps13aQ5H8C4 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC19.77■□□□□ 0.75
Vps13aQ5H8C4 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
Vps13aQ5H8C4 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
Vps13aQ5H8C4 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Vps13aQ5H8C4 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
Vps13aQ5H8C4 Gm5643-201ENSMUST00000117081 966 ntBASIC19.76■□□□□ 0.75
Vps13aQ5H8C4 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Vps13aQ5H8C4 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Vps13aQ5H8C4 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Vps13aQ5H8C4 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Vps13aQ5H8C4 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC19.76■□□□□ 0.75
Vps13aQ5H8C4 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC19.76■□□□□ 0.75
Vps13aQ5H8C4 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Vps13aQ5H8C4 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Vps13aQ5H8C4 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Vps13aQ5H8C4 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Vps13aQ5H8C4 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Vps13aQ5H8C4 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Vps13aQ5H8C4 Gm10655-201ENSMUST00000098658 1397 ntBASIC19.75■□□□□ 0.75
Vps13aQ5H8C4 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Vps13aQ5H8C4 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Vps13aQ5H8C4 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
Vps13aQ5H8C4 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC19.74■□□□□ 0.75
Vps13aQ5H8C4 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC19.74■□□□□ 0.75
Vps13aQ5H8C4 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Vps13aQ5H8C4 Gm6576-201ENSMUST00000169678 883 ntBASIC19.74■□□□□ 0.75
Vps13aQ5H8C4 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC19.74■□□□□ 0.75
Vps13aQ5H8C4 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Vps13aQ5H8C4 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Vps13aQ5H8C4 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Vps13aQ5H8C4 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC19.73■□□□□ 0.75
Vps13aQ5H8C4 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Vps13aQ5H8C4 0610010K14Rik-207ENSMUST00000108577 659 ntTSL 5 BASIC19.73■□□□□ 0.75
Vps13aQ5H8C4 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC19.73■□□□□ 0.75
Vps13aQ5H8C4 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Vps13aQ5H8C4 CT030146.1-201ENSMUST00000220919 217 ntBASIC19.73■□□□□ 0.75
Retrieved 100 of 76,532 protein–RNA pairs in 13.7 ms