Protein–RNA interactions for Protein: Q3V061

Trim80, Tripartite motif-containing 80, mousemouse

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim80Q3V061 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC20.13■□□□□ 0.81
Trim80Q3V061 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC20.13■□□□□ 0.81
Trim80Q3V061 Gm43182-201ENSMUST00000199476 2528 ntBASIC20.13■□□□□ 0.81
Trim80Q3V061 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Trim80Q3V061 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Trim80Q3V061 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Trim80Q3V061 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC20.13■□□□□ 0.81
Trim80Q3V061 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Trim80Q3V061 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Trim80Q3V061 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Trim80Q3V061 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Trim80Q3V061 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Trim80Q3V061 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Trim80Q3V061 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC20.11■□□□□ 0.81
Trim80Q3V061 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Trim80Q3V061 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC20.11■□□□□ 0.81
Trim80Q3V061 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Trim80Q3V061 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Trim80Q3V061 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Trim80Q3V061 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Trim80Q3V061 Gm12922-201ENSMUST00000120626 809 ntBASIC20.11■□□□□ 0.81
Trim80Q3V061 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC20.11■□□□□ 0.81
Trim80Q3V061 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC20.11■□□□□ 0.81
Trim80Q3V061 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC20.11■□□□□ 0.81
Trim80Q3V061 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
Trim80Q3V061 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC20.11■□□□□ 0.81
Trim80Q3V061 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Trim80Q3V061 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
Trim80Q3V061 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Trim80Q3V061 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Trim80Q3V061 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Trim80Q3V061 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC20.1■□□□□ 0.81
Trim80Q3V061 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Trim80Q3V061 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Trim80Q3V061 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC20.1■□□□□ 0.81
Trim80Q3V061 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Trim80Q3V061 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC20.1■□□□□ 0.81
Trim80Q3V061 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Trim80Q3V061 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Trim80Q3V061 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC20.1■□□□□ 0.81
Trim80Q3V061 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Trim80Q3V061 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Trim80Q3V061 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Trim80Q3V061 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Trim80Q3V061 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
Trim80Q3V061 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC20.09■□□□□ 0.81
Trim80Q3V061 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Trim80Q3V061 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC20.09■□□□□ 0.81
Trim80Q3V061 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Trim80Q3V061 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Trim80Q3V061 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Trim80Q3V061 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
Trim80Q3V061 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Trim80Q3V061 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
Trim80Q3V061 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Trim80Q3V061 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.8
Trim80Q3V061 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Trim80Q3V061 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.8
Trim80Q3V061 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Trim80Q3V061 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Trim80Q3V061 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC20.07■□□□□ 0.8
Trim80Q3V061 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Trim80Q3V061 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Trim80Q3V061 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC20.07■□□□□ 0.8
Trim80Q3V061 Gm10399-202ENSMUST00000202768 748 ntBASIC20.07■□□□□ 0.8
Trim80Q3V061 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC20.07■□□□□ 0.8
Trim80Q3V061 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Trim80Q3V061 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Trim80Q3V061 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Trim80Q3V061 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
Trim80Q3V061 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Trim80Q3V061 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Trim80Q3V061 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Trim80Q3V061 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Trim80Q3V061 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Trim80Q3V061 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
Trim80Q3V061 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Trim80Q3V061 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Trim80Q3V061 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Trim80Q3V061 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
Trim80Q3V061 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Trim80Q3V061 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Trim80Q3V061 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Trim80Q3V061 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC20.06■□□□□ 0.8
Trim80Q3V061 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Trim80Q3V061 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Trim80Q3V061 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Trim80Q3V061 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Trim80Q3V061 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Trim80Q3V061 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC20.05■□□□□ 0.8
Trim80Q3V061 Gm21956-201ENSMUST00000179946 522 ntBASIC20.05■□□□□ 0.8
Trim80Q3V061 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Trim80Q3V061 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
Trim80Q3V061 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Trim80Q3V061 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC20.05■□□□□ 0.8
Trim80Q3V061 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
Trim80Q3V061 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Trim80Q3V061 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Trim80Q3V061 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Trim80Q3V061 Dapk1-207ENSMUST00000226059 5009 ntBASIC20.04■□□□□ 0.8
Retrieved 100 of 76,532 protein–RNA pairs in 15.7 ms