Protein–RNA interactions for Protein: Q3UV31

Rnf223, RING finger protein 223, mousemouse

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf223Q3UV31 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC19.14■□□□□ 0.65
Rnf223Q3UV31 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC19.14■□□□□ 0.65
Rnf223Q3UV31 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Rnf223Q3UV31 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Rnf223Q3UV31 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC19.14■□□□□ 0.65
Rnf223Q3UV31 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Rnf223Q3UV31 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Rnf223Q3UV31 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Rnf223Q3UV31 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Rnf223Q3UV31 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
Rnf223Q3UV31 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Rnf223Q3UV31 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC19.13■□□□□ 0.65
Rnf223Q3UV31 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC19.13■□□□□ 0.65
Rnf223Q3UV31 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Rnf223Q3UV31 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Rnf223Q3UV31 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Rnf223Q3UV31 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Rnf223Q3UV31 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Rnf223Q3UV31 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Rnf223Q3UV31 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC19.13■□□□□ 0.65
Rnf223Q3UV31 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Rnf223Q3UV31 Gm43006-201ENSMUST00000197702 1602 ntBASIC19.13■□□□□ 0.65
Rnf223Q3UV31 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Rnf223Q3UV31 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Rnf223Q3UV31 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Rnf223Q3UV31 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Rnf223Q3UV31 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Rnf223Q3UV31 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
Rnf223Q3UV31 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Rnf223Q3UV31 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Rnf223Q3UV31 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Rnf223Q3UV31 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Rnf223Q3UV31 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC19.12■□□□□ 0.65
Rnf223Q3UV31 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
Rnf223Q3UV31 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
Rnf223Q3UV31 Gm43909-201ENSMUST00000203443 1876 ntBASIC19.11■□□□□ 0.65
Rnf223Q3UV31 AA386476-201ENSMUST00000098781 1665 ntBASIC19.11■□□□□ 0.65
Rnf223Q3UV31 Gm42911-201ENSMUST00000199360 1630 ntBASIC19.11■□□□□ 0.65
Rnf223Q3UV31 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Rnf223Q3UV31 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Rnf223Q3UV31 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC19.11■□□□□ 0.65
Rnf223Q3UV31 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Rnf223Q3UV31 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Rnf223Q3UV31 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
Rnf223Q3UV31 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC19.11■□□□□ 0.65
Rnf223Q3UV31 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Rnf223Q3UV31 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC19.1■□□□□ 0.65
Rnf223Q3UV31 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Rnf223Q3UV31 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Rnf223Q3UV31 Gm14281-201ENSMUST00000121700 1294 ntBASIC19.1■□□□□ 0.65
Rnf223Q3UV31 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
Rnf223Q3UV31 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Rnf223Q3UV31 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Rnf223Q3UV31 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Rnf223Q3UV31 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
Rnf223Q3UV31 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Rnf223Q3UV31 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Rnf223Q3UV31 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
Rnf223Q3UV31 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Rnf223Q3UV31 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Rnf223Q3UV31 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Rnf223Q3UV31 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Rnf223Q3UV31 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
Rnf223Q3UV31 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Rnf223Q3UV31 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Rnf223Q3UV31 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Rnf223Q3UV31 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Rnf223Q3UV31 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.65
Rnf223Q3UV31 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Rnf223Q3UV31 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Rnf223Q3UV31 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Rnf223Q3UV31 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC19.08■□□□□ 0.64
Rnf223Q3UV31 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC19.08■□□□□ 0.64
Rnf223Q3UV31 Gm42569-201ENSMUST00000200539 472 ntBASIC19.08■□□□□ 0.64
Rnf223Q3UV31 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Rnf223Q3UV31 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC19.07■□□□□ 0.64
Rnf223Q3UV31 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Rnf223Q3UV31 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Rnf223Q3UV31 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Rnf223Q3UV31 Gm10849-201ENSMUST00000100397 618 ntBASIC19.07■□□□□ 0.64
Rnf223Q3UV31 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Rnf223Q3UV31 Gm10033-202ENSMUST00000211874 928 ntBASIC19.07■□□□□ 0.64
Rnf223Q3UV31 Gm9988-201ENSMUST00000069786 435 ntBASIC19.07■□□□□ 0.64
Rnf223Q3UV31 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Rnf223Q3UV31 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Rnf223Q3UV31 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Rnf223Q3UV31 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Rnf223Q3UV31 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Rnf223Q3UV31 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Rnf223Q3UV31 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Rnf223Q3UV31 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC19.06■□□□□ 0.64
Rnf223Q3UV31 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Rnf223Q3UV31 Gm42778-201ENSMUST00000199644 553 ntBASIC19.06■□□□□ 0.64
Rnf223Q3UV31 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC19.06■□□□□ 0.64
Rnf223Q3UV31 AC164629.5-201ENSMUST00000220387 632 ntBASIC19.06■□□□□ 0.64
Rnf223Q3UV31 AC154266.1-201ENSMUST00000223190 503 ntBASIC19.06■□□□□ 0.64
Rnf223Q3UV31 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Rnf223Q3UV31 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC19.06■□□□□ 0.64
Rnf223Q3UV31 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Rnf223Q3UV31 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Retrieved 100 of 76,532 protein–RNA pairs in 12.7 ms