Protein–RNA interactions for Protein: Q3USH1

Fam196a, Protein FAM196A, mousemouse

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fam196aQ3USH1 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC19.87■□□□□ 0.77
Fam196aQ3USH1 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Fam196aQ3USH1 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Fam196aQ3USH1 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Fam196aQ3USH1 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Fam196aQ3USH1 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC19.86■□□□□ 0.77
Fam196aQ3USH1 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Fam196aQ3USH1 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Fam196aQ3USH1 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
Fam196aQ3USH1 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
Fam196aQ3USH1 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Fam196aQ3USH1 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
Fam196aQ3USH1 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Fam196aQ3USH1 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Fam196aQ3USH1 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC19.85■□□□□ 0.77
Fam196aQ3USH1 Gm26524-201ENSMUST00000192339 390 ntBASIC19.85■□□□□ 0.77
Fam196aQ3USH1 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Fam196aQ3USH1 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC19.85■□□□□ 0.77
Fam196aQ3USH1 CT030146.1-201ENSMUST00000220919 217 ntBASIC19.85■□□□□ 0.77
Fam196aQ3USH1 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Fam196aQ3USH1 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
Fam196aQ3USH1 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Fam196aQ3USH1 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Fam196aQ3USH1 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Fam196aQ3USH1 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Fam196aQ3USH1 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Fam196aQ3USH1 Gm27275-201ENSMUST00000184318 272 ntBASIC19.84■□□□□ 0.77
Fam196aQ3USH1 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC19.84■□□□□ 0.77
Fam196aQ3USH1 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC19.84■□□□□ 0.77
Fam196aQ3USH1 Rab3c-203ENSMUST00000224180 967 ntBASIC19.84■□□□□ 0.77
Fam196aQ3USH1 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Fam196aQ3USH1 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Fam196aQ3USH1 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Fam196aQ3USH1 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Fam196aQ3USH1 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Fam196aQ3USH1 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Fam196aQ3USH1 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Fam196aQ3USH1 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Fam196aQ3USH1 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Fam196aQ3USH1 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Fam196aQ3USH1 Gm13534-201ENSMUST00000121169 513 ntBASIC19.83■□□□□ 0.77
Fam196aQ3USH1 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Fam196aQ3USH1 Vkorc1-203ENSMUST00000206053 606 ntTSL 3 BASIC19.83■□□□□ 0.77
Fam196aQ3USH1 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Fam196aQ3USH1 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
Fam196aQ3USH1 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Fam196aQ3USH1 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Fam196aQ3USH1 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Fam196aQ3USH1 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC19.82■□□□□ 0.76
Fam196aQ3USH1 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Fam196aQ3USH1 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Fam196aQ3USH1 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Fam196aQ3USH1 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Fam196aQ3USH1 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC19.81■□□□□ 0.76
Fam196aQ3USH1 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
Fam196aQ3USH1 Gm715-201ENSMUST00000117865 831 ntBASIC19.81■□□□□ 0.76
Fam196aQ3USH1 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
Fam196aQ3USH1 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Fam196aQ3USH1 AL672049.1-201ENSMUST00000197943 91 ntBASIC19.81■□□□□ 0.76
Fam196aQ3USH1 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
Fam196aQ3USH1 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
Fam196aQ3USH1 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC19.81■□□□□ 0.76
Fam196aQ3USH1 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Fam196aQ3USH1 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
Fam196aQ3USH1 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
Fam196aQ3USH1 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Fam196aQ3USH1 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Fam196aQ3USH1 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
Fam196aQ3USH1 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
Fam196aQ3USH1 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
Fam196aQ3USH1 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC19.8■□□□□ 0.76
Fam196aQ3USH1 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Fam196aQ3USH1 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
Fam196aQ3USH1 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
Fam196aQ3USH1 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
Fam196aQ3USH1 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
Fam196aQ3USH1 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Fam196aQ3USH1 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Fam196aQ3USH1 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Fam196aQ3USH1 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Fam196aQ3USH1 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Fam196aQ3USH1 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC19.79■□□□□ 0.76
Fam196aQ3USH1 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Fam196aQ3USH1 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Fam196aQ3USH1 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC19.79■□□□□ 0.76
Fam196aQ3USH1 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Fam196aQ3USH1 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Fam196aQ3USH1 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Fam196aQ3USH1 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Fam196aQ3USH1 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Fam196aQ3USH1 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC19.78■□□□□ 0.76
Fam196aQ3USH1 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Fam196aQ3USH1 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC19.78■□□□□ 0.76
Fam196aQ3USH1 Gm5643-201ENSMUST00000117081 966 ntBASIC19.78■□□□□ 0.76
Fam196aQ3USH1 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC19.78■□□□□ 0.76
Fam196aQ3USH1 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC19.78■□□□□ 0.76
Fam196aQ3USH1 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Fam196aQ3USH1 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Fam196aQ3USH1 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Fam196aQ3USH1 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
Retrieved 100 of 76,532 protein–RNA pairs in 16.7 ms