Protein–RNA interactions for Protein: Q3UP24

Nlrc4, NLR family CARD domain-containing protein 4, mousemouse

Predictions only

Length 1,024 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nlrc4Q3UP24 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC20.74■□□□□ 0.91
Nlrc4Q3UP24 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Nlrc4Q3UP24 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Nlrc4Q3UP24 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
Nlrc4Q3UP24 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Nlrc4Q3UP24 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Nlrc4Q3UP24 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
Nlrc4Q3UP24 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Nlrc4Q3UP24 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
Nlrc4Q3UP24 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Nlrc4Q3UP24 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Nlrc4Q3UP24 Gm6802-201ENSMUST00000167843 1983 ntBASIC20.74■□□□□ 0.91
Nlrc4Q3UP24 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC20.74■□□□□ 0.91
Nlrc4Q3UP24 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Nlrc4Q3UP24 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
Nlrc4Q3UP24 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Nlrc4Q3UP24 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
Nlrc4Q3UP24 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
Nlrc4Q3UP24 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC20.73■□□□□ 0.91
Nlrc4Q3UP24 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC20.73■□□□□ 0.91
Nlrc4Q3UP24 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Nlrc4Q3UP24 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Nlrc4Q3UP24 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Nlrc4Q3UP24 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
Nlrc4Q3UP24 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Nlrc4Q3UP24 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Nlrc4Q3UP24 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
Nlrc4Q3UP24 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
Nlrc4Q3UP24 Gm15039-201ENSMUST00000118914 875 ntBASIC20.72■□□□□ 0.91
Nlrc4Q3UP24 Gm21168-201ENSMUST00000199646 1096 ntBASIC20.72■□□□□ 0.91
Nlrc4Q3UP24 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC20.72■□□□□ 0.91
Nlrc4Q3UP24 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Nlrc4Q3UP24 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Nlrc4Q3UP24 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Nlrc4Q3UP24 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Nlrc4Q3UP24 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC20.72■□□□□ 0.91
Nlrc4Q3UP24 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Nlrc4Q3UP24 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Nlrc4Q3UP24 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Nlrc4Q3UP24 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Nlrc4Q3UP24 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Nlrc4Q3UP24 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC20.71■□□□□ 0.91
Nlrc4Q3UP24 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC20.71■□□□□ 0.91
Nlrc4Q3UP24 Gm26833-201ENSMUST00000180899 440 ntBASIC20.71■□□□□ 0.91
Nlrc4Q3UP24 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Nlrc4Q3UP24 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC20.71■□□□□ 0.91
Nlrc4Q3UP24 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Nlrc4Q3UP24 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.91
Nlrc4Q3UP24 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Nlrc4Q3UP24 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
Nlrc4Q3UP24 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Nlrc4Q3UP24 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
Nlrc4Q3UP24 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Nlrc4Q3UP24 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Nlrc4Q3UP24 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Nlrc4Q3UP24 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC20.7■□□□□ 0.9
Nlrc4Q3UP24 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Nlrc4Q3UP24 Gm40848-201ENSMUST00000221998 324 ntBASIC20.69■□□□□ 0.9
Nlrc4Q3UP24 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Nlrc4Q3UP24 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Nlrc4Q3UP24 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Nlrc4Q3UP24 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
Nlrc4Q3UP24 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Nlrc4Q3UP24 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
Nlrc4Q3UP24 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Nlrc4Q3UP24 AA386476-201ENSMUST00000098781 1665 ntBASIC20.68■□□□□ 0.9
Nlrc4Q3UP24 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Nlrc4Q3UP24 Cdc34b-202ENSMUST00000188741 1252 ntBASIC20.68■□□□□ 0.9
Nlrc4Q3UP24 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Nlrc4Q3UP24 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
Nlrc4Q3UP24 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Nlrc4Q3UP24 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Nlrc4Q3UP24 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC20.68■□□□□ 0.9
Nlrc4Q3UP24 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Nlrc4Q3UP24 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Nlrc4Q3UP24 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC20.67■□□□□ 0.9
Nlrc4Q3UP24 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Nlrc4Q3UP24 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC20.67■□□□□ 0.9
Nlrc4Q3UP24 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Nlrc4Q3UP24 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Nlrc4Q3UP24 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Nlrc4Q3UP24 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Nlrc4Q3UP24 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Nlrc4Q3UP24 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
Nlrc4Q3UP24 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
Nlrc4Q3UP24 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
Nlrc4Q3UP24 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC20.66■□□□□ 0.9
Nlrc4Q3UP24 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Nlrc4Q3UP24 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Nlrc4Q3UP24 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Nlrc4Q3UP24 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC20.66■□□□□ 0.9
Nlrc4Q3UP24 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
Nlrc4Q3UP24 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
Nlrc4Q3UP24 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Nlrc4Q3UP24 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Nlrc4Q3UP24 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
Nlrc4Q3UP24 Gm11421-201ENSMUST00000122124 294 ntBASIC20.65■□□□□ 0.9
Nlrc4Q3UP24 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC20.65■□□□□ 0.9
Nlrc4Q3UP24 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
Nlrc4Q3UP24 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
Retrieved 100 of 76,532 protein–RNA pairs in 24.3 ms