Protein–RNA interactions for Protein: Q3UMB5

Smcr8, Guanine nucleotide exchange protein SMCR8, mousemouse

Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smcr8Q3UMB5 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Smcr8Q3UMB5 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Smcr8Q3UMB5 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Smcr8Q3UMB5 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.97
Smcr8Q3UMB5 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC21.08■□□□□ 0.97
Smcr8Q3UMB5 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
Smcr8Q3UMB5 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC21.08■□□□□ 0.97
Smcr8Q3UMB5 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC21.08■□□□□ 0.97
Smcr8Q3UMB5 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Smcr8Q3UMB5 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Smcr8Q3UMB5 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC21.08■□□□□ 0.97
Smcr8Q3UMB5 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
Smcr8Q3UMB5 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC21.08■□□□□ 0.96
Smcr8Q3UMB5 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
Smcr8Q3UMB5 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
Smcr8Q3UMB5 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC21.07■□□□□ 0.96
Smcr8Q3UMB5 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
Smcr8Q3UMB5 Snhg20-203ENSMUST00000182811 2153 ntBASIC21.07■□□□□ 0.96
Smcr8Q3UMB5 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
Smcr8Q3UMB5 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Smcr8Q3UMB5 Gm29257-201ENSMUST00000186115 639 ntBASIC21.07■□□□□ 0.96
Smcr8Q3UMB5 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC21.07■□□□□ 0.96
Smcr8Q3UMB5 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Smcr8Q3UMB5 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Smcr8Q3UMB5 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC21.06■□□□□ 0.96
Smcr8Q3UMB5 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
Smcr8Q3UMB5 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
Smcr8Q3UMB5 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
Smcr8Q3UMB5 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Smcr8Q3UMB5 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC21.06■□□□□ 0.96
Smcr8Q3UMB5 Gm18671-201ENSMUST00000214826 683 ntBASIC21.06■□□□□ 0.96
Smcr8Q3UMB5 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC21.06■□□□□ 0.96
Smcr8Q3UMB5 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC21.06■□□□□ 0.96
Smcr8Q3UMB5 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC21.06■□□□□ 0.96
Smcr8Q3UMB5 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
Smcr8Q3UMB5 Gm15043-201ENSMUST00000118843 1543 ntBASIC21.05■□□□□ 0.96
Smcr8Q3UMB5 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Smcr8Q3UMB5 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Smcr8Q3UMB5 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Smcr8Q3UMB5 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Smcr8Q3UMB5 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC21.05■□□□□ 0.96
Smcr8Q3UMB5 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC21.05■□□□□ 0.96
Smcr8Q3UMB5 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Smcr8Q3UMB5 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Smcr8Q3UMB5 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
Smcr8Q3UMB5 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Smcr8Q3UMB5 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Smcr8Q3UMB5 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC21.05■□□□□ 0.96
Smcr8Q3UMB5 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
Smcr8Q3UMB5 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
Smcr8Q3UMB5 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Smcr8Q3UMB5 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC21.04■□□□□ 0.96
Smcr8Q3UMB5 Gm27405-201ENSMUST00000184201 112 ntBASIC21.04■□□□□ 0.96
Smcr8Q3UMB5 Gm42778-201ENSMUST00000199644 553 ntBASIC21.04■□□□□ 0.96
Smcr8Q3UMB5 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC21.04■□□□□ 0.96
Smcr8Q3UMB5 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC21.04■□□□□ 0.96
Smcr8Q3UMB5 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC21.03■□□□□ 0.96
Smcr8Q3UMB5 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC21.03■□□□□ 0.96
Smcr8Q3UMB5 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC21.03■□□□□ 0.96
Smcr8Q3UMB5 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC21.03■□□□□ 0.96
Smcr8Q3UMB5 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC21.03■□□□□ 0.96
Smcr8Q3UMB5 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Smcr8Q3UMB5 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Smcr8Q3UMB5 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Smcr8Q3UMB5 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
Smcr8Q3UMB5 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Smcr8Q3UMB5 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC21.02■□□□□ 0.96
Smcr8Q3UMB5 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Smcr8Q3UMB5 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
Smcr8Q3UMB5 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
Smcr8Q3UMB5 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
Smcr8Q3UMB5 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.95
Smcr8Q3UMB5 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Smcr8Q3UMB5 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
Smcr8Q3UMB5 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Smcr8Q3UMB5 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Smcr8Q3UMB5 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Smcr8Q3UMB5 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
Smcr8Q3UMB5 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
Smcr8Q3UMB5 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Smcr8Q3UMB5 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC21■□□□□ 0.95
Smcr8Q3UMB5 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Smcr8Q3UMB5 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
Smcr8Q3UMB5 Gm10849-201ENSMUST00000100397 618 ntBASIC21■□□□□ 0.95
Smcr8Q3UMB5 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC21■□□□□ 0.95
Smcr8Q3UMB5 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC21■□□□□ 0.95
Smcr8Q3UMB5 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC21■□□□□ 0.95
Smcr8Q3UMB5 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC21■□□□□ 0.95
Smcr8Q3UMB5 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC21■□□□□ 0.95
Smcr8Q3UMB5 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
Smcr8Q3UMB5 Gm9988-201ENSMUST00000069786 435 ntBASIC21■□□□□ 0.95
Smcr8Q3UMB5 Iqck-206ENSMUST00000208658 2891 ntBASIC21■□□□□ 0.95
Smcr8Q3UMB5 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
Smcr8Q3UMB5 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC21■□□□□ 0.95
Smcr8Q3UMB5 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Smcr8Q3UMB5 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Smcr8Q3UMB5 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Smcr8Q3UMB5 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Smcr8Q3UMB5 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC20.99■□□□□ 0.95
Smcr8Q3UMB5 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Retrieved 100 of 76,532 protein–RNA pairs in 15.7 ms