Protein–RNA interactions for Protein: Q3U1Y4

Dennd4b, DENN domain-containing protein 4B, mousemouse

Predictions only

Length 1,499 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Dennd4bQ3U1Y4 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC29.32■■■□□ 2.28
Dennd4bQ3U1Y4 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC29.32■■■□□ 2.28
Dennd4bQ3U1Y4 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC29.32■■■□□ 2.28
Dennd4bQ3U1Y4 Gm8520-201ENSMUST00000186517 868 ntBASIC29.32■■■□□ 2.28
Dennd4bQ3U1Y4 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC29.32■■■□□ 2.28
Dennd4bQ3U1Y4 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC29.31■■■□□ 2.28
Dennd4bQ3U1Y4 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC29.31■■■□□ 2.28
Dennd4bQ3U1Y4 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC29.31■■■□□ 2.28
Dennd4bQ3U1Y4 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC29.31■■■□□ 2.28
Dennd4bQ3U1Y4 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC29.31■■■□□ 2.28
Dennd4bQ3U1Y4 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC29.31■■■□□ 2.28
Dennd4bQ3U1Y4 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC29.31■■■□□ 2.28
Dennd4bQ3U1Y4 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC29.31■■■□□ 2.28
Dennd4bQ3U1Y4 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC29.3■■■□□ 2.28
Dennd4bQ3U1Y4 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC29.3■■■□□ 2.28
Dennd4bQ3U1Y4 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC29.3■■■□□ 2.28
Dennd4bQ3U1Y4 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC29.3■■■□□ 2.28
Dennd4bQ3U1Y4 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC29.3■■■□□ 2.28
Dennd4bQ3U1Y4 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC29.3■■■□□ 2.28
Dennd4bQ3U1Y4 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC29.3■■■□□ 2.28
Dennd4bQ3U1Y4 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC29.29■■■□□ 2.28
Dennd4bQ3U1Y4 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC29.29■■■□□ 2.28
Dennd4bQ3U1Y4 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC29.29■■■□□ 2.28
Dennd4bQ3U1Y4 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC29.29■■■□□ 2.28
Dennd4bQ3U1Y4 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC29.29■■■□□ 2.28
Dennd4bQ3U1Y4 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC29.28■■■□□ 2.28
Dennd4bQ3U1Y4 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC29.28■■■□□ 2.28
Dennd4bQ3U1Y4 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC29.28■■■□□ 2.28
Dennd4bQ3U1Y4 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC29.28■■■□□ 2.28
Dennd4bQ3U1Y4 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC29.28■■■□□ 2.28
Dennd4bQ3U1Y4 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC29.28■■■□□ 2.28
Dennd4bQ3U1Y4 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC29.27■■■□□ 2.28
Dennd4bQ3U1Y4 Mir7071-201ENSMUST00000184847 69 ntBASIC29.27■■■□□ 2.28
Dennd4bQ3U1Y4 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC29.27■■■□□ 2.28
Dennd4bQ3U1Y4 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC29.27■■■□□ 2.28
Dennd4bQ3U1Y4 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC29.26■■■□□ 2.27
Dennd4bQ3U1Y4 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC29.26■■■□□ 2.27
Dennd4bQ3U1Y4 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC29.26■■■□□ 2.27
Dennd4bQ3U1Y4 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC29.26■■■□□ 2.27
Dennd4bQ3U1Y4 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC29.26■■■□□ 2.27
Dennd4bQ3U1Y4 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC29.26■■■□□ 2.27
Dennd4bQ3U1Y4 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC29.26■■■□□ 2.27
Dennd4bQ3U1Y4 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC29.25■■■□□ 2.27
Dennd4bQ3U1Y4 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC29.25■■■□□ 2.27
Dennd4bQ3U1Y4 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC29.25■■■□□ 2.27
Dennd4bQ3U1Y4 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC29.25■■■□□ 2.27
Dennd4bQ3U1Y4 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC29.25■■■□□ 2.27
Dennd4bQ3U1Y4 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC29.25■■■□□ 2.27
Dennd4bQ3U1Y4 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC29.25■■■□□ 2.27
Dennd4bQ3U1Y4 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC29.25■■■□□ 2.27
Dennd4bQ3U1Y4 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC29.24■■■□□ 2.27
Dennd4bQ3U1Y4 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC29.24■■■□□ 2.27
Dennd4bQ3U1Y4 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC29.24■■■□□ 2.27
Dennd4bQ3U1Y4 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC29.24■■■□□ 2.27
Dennd4bQ3U1Y4 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC29.24■■■□□ 2.27
Dennd4bQ3U1Y4 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC29.24■■■□□ 2.27
Dennd4bQ3U1Y4 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC29.23■■■□□ 2.27
Dennd4bQ3U1Y4 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC29.23■■■□□ 2.27
Dennd4bQ3U1Y4 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC29.23■■■□□ 2.27
Dennd4bQ3U1Y4 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC29.23■■■□□ 2.27
Dennd4bQ3U1Y4 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC29.23■■■□□ 2.27
Dennd4bQ3U1Y4 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC29.23■■■□□ 2.27
Dennd4bQ3U1Y4 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC29.23■■■□□ 2.27
Dennd4bQ3U1Y4 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC29.23■■■□□ 2.27
Dennd4bQ3U1Y4 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC29.23■■■□□ 2.27
Dennd4bQ3U1Y4 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC29.23■■■□□ 2.27
Dennd4bQ3U1Y4 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC29.22■■■□□ 2.27
Dennd4bQ3U1Y4 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC29.22■■■□□ 2.27
Dennd4bQ3U1Y4 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC29.22■■■□□ 2.27
Dennd4bQ3U1Y4 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC29.22■■■□□ 2.27
Dennd4bQ3U1Y4 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC29.22■■■□□ 2.27
Dennd4bQ3U1Y4 Gm13148-201ENSMUST00000118892 745 ntBASIC29.21■■■□□ 2.27
Dennd4bQ3U1Y4 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC29.2■■■□□ 2.27
Dennd4bQ3U1Y4 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC29.2■■■□□ 2.27
Dennd4bQ3U1Y4 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC29.2■■■□□ 2.27
Dennd4bQ3U1Y4 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC29.2■■■□□ 2.27
Dennd4bQ3U1Y4 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC29.2■■■□□ 2.27
Dennd4bQ3U1Y4 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC29.2■■■□□ 2.27
Dennd4bQ3U1Y4 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC29.2■■■□□ 2.26
Dennd4bQ3U1Y4 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC29.2■■■□□ 2.26
Dennd4bQ3U1Y4 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC29.2■■■□□ 2.26
Dennd4bQ3U1Y4 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC29.19■■■□□ 2.26
Dennd4bQ3U1Y4 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC29.19■■■□□ 2.26
Dennd4bQ3U1Y4 Gm3807-201ENSMUST00000193520 1168 ntBASIC29.19■■■□□ 2.26
Dennd4bQ3U1Y4 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC29.19■■■□□ 2.26
Dennd4bQ3U1Y4 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC29.19■■■□□ 2.26
Dennd4bQ3U1Y4 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC29.18■■■□□ 2.26
Dennd4bQ3U1Y4 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC29.18■■■□□ 2.26
Dennd4bQ3U1Y4 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC29.18■■■□□ 2.26
Dennd4bQ3U1Y4 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC29.18■■■□□ 2.26
Dennd4bQ3U1Y4 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC29.18■■■□□ 2.26
Dennd4bQ3U1Y4 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC29.18■■■□□ 2.26
Dennd4bQ3U1Y4 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC29.17■■■□□ 2.26
Dennd4bQ3U1Y4 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC29.17■■■□□ 2.26
Dennd4bQ3U1Y4 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC29.17■■■□□ 2.26
Dennd4bQ3U1Y4 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC29.17■■■□□ 2.26
Dennd4bQ3U1Y4 Gm37035-201ENSMUST00000194809 2148 ntBASIC29.17■■■□□ 2.26
Dennd4bQ3U1Y4 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC29.17■■■□□ 2.26
Dennd4bQ3U1Y4 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC29.17■■■□□ 2.26
Dennd4bQ3U1Y4 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC29.17■■■□□ 2.26
Retrieved 100 of 76,532 protein–RNA pairs in 54.7 ms