Protein–RNA interactions for Protein: Q3TX51

Lrrc28, Leucine-rich repeat-containing protein 28, mousemouse

Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lrrc28Q3TX51 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Lrrc28Q3TX51 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Lrrc28Q3TX51 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Lrrc28Q3TX51 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Lrrc28Q3TX51 Gm10849-201ENSMUST00000100397 618 ntBASIC18.62■□□□□ 0.57
Lrrc28Q3TX51 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Lrrc28Q3TX51 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC18.62■□□□□ 0.57
Lrrc28Q3TX51 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Lrrc28Q3TX51 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Lrrc28Q3TX51 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC18.62■□□□□ 0.57
Lrrc28Q3TX51 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
Lrrc28Q3TX51 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
Lrrc28Q3TX51 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC18.62■□□□□ 0.57
Lrrc28Q3TX51 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Lrrc28Q3TX51 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
Lrrc28Q3TX51 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Lrrc28Q3TX51 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Lrrc28Q3TX51 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC18.61■□□□□ 0.57
Lrrc28Q3TX51 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC18.61■□□□□ 0.57
Lrrc28Q3TX51 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Lrrc28Q3TX51 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Lrrc28Q3TX51 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC18.61■□□□□ 0.57
Lrrc28Q3TX51 Gm7291-201ENSMUST00000199147 382 ntBASIC18.61■□□□□ 0.57
Lrrc28Q3TX51 Gm42569-201ENSMUST00000200539 472 ntBASIC18.61■□□□□ 0.57
Lrrc28Q3TX51 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC18.61■□□□□ 0.57
Lrrc28Q3TX51 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
Lrrc28Q3TX51 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Lrrc28Q3TX51 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Lrrc28Q3TX51 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Lrrc28Q3TX51 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Lrrc28Q3TX51 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Lrrc28Q3TX51 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Lrrc28Q3TX51 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Lrrc28Q3TX51 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC18.6■□□□□ 0.57
Lrrc28Q3TX51 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
Lrrc28Q3TX51 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Lrrc28Q3TX51 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
Lrrc28Q3TX51 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Lrrc28Q3TX51 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Lrrc28Q3TX51 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC18.59■□□□□ 0.57
Lrrc28Q3TX51 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Lrrc28Q3TX51 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
Lrrc28Q3TX51 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Lrrc28Q3TX51 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Lrrc28Q3TX51 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Lrrc28Q3TX51 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Lrrc28Q3TX51 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Lrrc28Q3TX51 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Lrrc28Q3TX51 Gm27405-201ENSMUST00000184201 112 ntBASIC18.59■□□□□ 0.57
Lrrc28Q3TX51 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Lrrc28Q3TX51 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Lrrc28Q3TX51 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
Lrrc28Q3TX51 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Lrrc28Q3TX51 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Lrrc28Q3TX51 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.57
Lrrc28Q3TX51 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC18.58■□□□□ 0.57
Lrrc28Q3TX51 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC18.58■□□□□ 0.57
Lrrc28Q3TX51 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
Lrrc28Q3TX51 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
Lrrc28Q3TX51 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
Lrrc28Q3TX51 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Lrrc28Q3TX51 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
Lrrc28Q3TX51 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Lrrc28Q3TX51 Gm10033-202ENSMUST00000211874 928 ntBASIC18.58■□□□□ 0.56
Lrrc28Q3TX51 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Lrrc28Q3TX51 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Lrrc28Q3TX51 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Lrrc28Q3TX51 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC18.58■□□□□ 0.56
Lrrc28Q3TX51 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC18.58■□□□□ 0.56
Lrrc28Q3TX51 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Lrrc28Q3TX51 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC18.57■□□□□ 0.56
Lrrc28Q3TX51 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Lrrc28Q3TX51 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
Lrrc28Q3TX51 Gm10571-201ENSMUST00000097869 1638 ntBASIC18.57■□□□□ 0.56
Lrrc28Q3TX51 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Lrrc28Q3TX51 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Lrrc28Q3TX51 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Lrrc28Q3TX51 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Lrrc28Q3TX51 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC18.57■□□□□ 0.56
Lrrc28Q3TX51 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Lrrc28Q3TX51 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Lrrc28Q3TX51 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
Lrrc28Q3TX51 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Lrrc28Q3TX51 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Lrrc28Q3TX51 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Lrrc28Q3TX51 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Lrrc28Q3TX51 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Lrrc28Q3TX51 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC18.56■□□□□ 0.56
Lrrc28Q3TX51 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Lrrc28Q3TX51 Gm42778-201ENSMUST00000199644 553 ntBASIC18.56■□□□□ 0.56
Lrrc28Q3TX51 Gm18671-201ENSMUST00000214826 683 ntBASIC18.56■□□□□ 0.56
Lrrc28Q3TX51 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
Lrrc28Q3TX51 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
Lrrc28Q3TX51 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC18.56■□□□□ 0.56
Lrrc28Q3TX51 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Lrrc28Q3TX51 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Lrrc28Q3TX51 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Lrrc28Q3TX51 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC18.55■□□□□ 0.56
Lrrc28Q3TX51 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC18.55■□□□□ 0.56
Lrrc28Q3TX51 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 17.6 ms