Protein–RNA interactions for Protein: Q3MI99

Ccbe1, Collagen and calcium-binding EGF domain-containing protein 1, mousemouse

Predictions only

Length 408 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccbe1Q3MI99 Gm11687-201ENSMUST00000118911 886 ntBASIC17.65■□□□□ 0.42
Ccbe1Q3MI99 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC17.65■□□□□ 0.42
Ccbe1Q3MI99 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC17.65■□□□□ 0.42
Ccbe1Q3MI99 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ccbe1Q3MI99 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ccbe1Q3MI99 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ccbe1Q3MI99 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ccbe1Q3MI99 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ccbe1Q3MI99 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Ccbe1Q3MI99 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC17.64■□□□□ 0.41
Ccbe1Q3MI99 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Ccbe1Q3MI99 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Ccbe1Q3MI99 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC17.64■□□□□ 0.41
Ccbe1Q3MI99 AC116713.1-201ENSMUST00000215074 430 ntBASIC17.64■□□□□ 0.41
Ccbe1Q3MI99 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Ccbe1Q3MI99 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Ccbe1Q3MI99 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Ccbe1Q3MI99 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Ccbe1Q3MI99 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Ccbe1Q3MI99 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Ccbe1Q3MI99 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Ccbe1Q3MI99 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ccbe1Q3MI99 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Ccbe1Q3MI99 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC17.63■□□□□ 0.41
Ccbe1Q3MI99 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ccbe1Q3MI99 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Ccbe1Q3MI99 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
Ccbe1Q3MI99 Gm9806-201ENSMUST00000051080 552 ntBASIC17.63■□□□□ 0.41
Ccbe1Q3MI99 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ccbe1Q3MI99 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Ccbe1Q3MI99 Gm42939-201ENSMUST00000197514 2205 ntBASIC17.63■□□□□ 0.41
Ccbe1Q3MI99 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ccbe1Q3MI99 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ccbe1Q3MI99 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ccbe1Q3MI99 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ccbe1Q3MI99 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC17.62■□□□□ 0.41
Ccbe1Q3MI99 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ccbe1Q3MI99 Gm12366-201ENSMUST00000121722 873 ntBASIC17.62■□□□□ 0.41
Ccbe1Q3MI99 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC17.62■□□□□ 0.41
Ccbe1Q3MI99 Gm45364-201ENSMUST00000210883 159 ntBASIC17.62■□□□□ 0.41
Ccbe1Q3MI99 Nsd1-206ENSMUST00000224918 1001 ntBASIC17.62■□□□□ 0.41
Ccbe1Q3MI99 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ccbe1Q3MI99 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ccbe1Q3MI99 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC17.62■□□□□ 0.41
Ccbe1Q3MI99 Gm5786-201ENSMUST00000085368 882 ntBASIC17.62■□□□□ 0.41
Ccbe1Q3MI99 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC17.62■□□□□ 0.41
Ccbe1Q3MI99 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ccbe1Q3MI99 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ccbe1Q3MI99 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ccbe1Q3MI99 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ccbe1Q3MI99 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ccbe1Q3MI99 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
Ccbe1Q3MI99 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ccbe1Q3MI99 Gm27502-201ENSMUST00000183495 199 ntBASIC17.61■□□□□ 0.41
Ccbe1Q3MI99 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ccbe1Q3MI99 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ccbe1Q3MI99 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
Ccbe1Q3MI99 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ccbe1Q3MI99 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ccbe1Q3MI99 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ccbe1Q3MI99 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Ccbe1Q3MI99 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ccbe1Q3MI99 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
Ccbe1Q3MI99 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ccbe1Q3MI99 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Ccbe1Q3MI99 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
Ccbe1Q3MI99 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Ccbe1Q3MI99 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Ccbe1Q3MI99 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC17.6■□□□□ 0.41
Ccbe1Q3MI99 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
Ccbe1Q3MI99 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Ccbe1Q3MI99 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Ccbe1Q3MI99 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Ccbe1Q3MI99 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Ccbe1Q3MI99 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC17.6■□□□□ 0.41
Ccbe1Q3MI99 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Ccbe1Q3MI99 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
Ccbe1Q3MI99 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Ccbe1Q3MI99 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ccbe1Q3MI99 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ccbe1Q3MI99 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ccbe1Q3MI99 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Ccbe1Q3MI99 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Ccbe1Q3MI99 Gm16201-202ENSMUST00000139218 2330 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Ccbe1Q3MI99 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Ccbe1Q3MI99 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ccbe1Q3MI99 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ccbe1Q3MI99 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC17.59■□□□□ 0.41
Ccbe1Q3MI99 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
Ccbe1Q3MI99 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Ccbe1Q3MI99 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ccbe1Q3MI99 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ccbe1Q3MI99 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.41
Ccbe1Q3MI99 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC17.58■□□□□ 0.41
Ccbe1Q3MI99 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Ccbe1Q3MI99 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
Ccbe1Q3MI99 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Ccbe1Q3MI99 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
Ccbe1Q3MI99 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Ccbe1Q3MI99 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 21.6 ms