Protein–RNA interactions for Protein: Q0VF58

Col19a1, Collagen alpha-1(XIX) chain, mousemouse

Predictions only

Length 1,136 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col19a1Q0VF58 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Col19a1Q0VF58 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Col19a1Q0VF58 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Col19a1Q0VF58 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC21.26■□□□□ 0.99
Col19a1Q0VF58 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Col19a1Q0VF58 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Col19a1Q0VF58 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Col19a1Q0VF58 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC21.25■□□□□ 0.99
Col19a1Q0VF58 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Col19a1Q0VF58 Lmbrd1-202ENSMUST00000186096 688 ntTSL 2 BASIC21.25■□□□□ 0.99
Col19a1Q0VF58 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Col19a1Q0VF58 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC21.25■□□□□ 0.99
Col19a1Q0VF58 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Col19a1Q0VF58 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Col19a1Q0VF58 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Col19a1Q0VF58 Rab3c-203ENSMUST00000224180 967 ntBASIC21.24■□□□□ 0.99
Col19a1Q0VF58 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Col19a1Q0VF58 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Col19a1Q0VF58 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Col19a1Q0VF58 AC153962.1-201ENSMUST00000218530 1948 ntBASIC21.23■□□□□ 0.99
Col19a1Q0VF58 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Col19a1Q0VF58 Gm12896-201ENSMUST00000118430 226 ntBASIC21.23■□□□□ 0.99
Col19a1Q0VF58 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Col19a1Q0VF58 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC21.23■□□□□ 0.99
Col19a1Q0VF58 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Col19a1Q0VF58 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Col19a1Q0VF58 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Col19a1Q0VF58 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Col19a1Q0VF58 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC21.22■□□□□ 0.99
Col19a1Q0VF58 Gm5643-201ENSMUST00000117081 966 ntBASIC21.22■□□□□ 0.99
Col19a1Q0VF58 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC21.22■□□□□ 0.99
Col19a1Q0VF58 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Col19a1Q0VF58 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Col19a1Q0VF58 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Col19a1Q0VF58 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC21.21■□□□□ 0.99
Col19a1Q0VF58 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC21.21■□□□□ 0.99
Col19a1Q0VF58 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC21.21■□□□□ 0.99
Col19a1Q0VF58 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Col19a1Q0VF58 Gm5913-201ENSMUST00000119397 1399 ntBASIC21.21■□□□□ 0.99
Col19a1Q0VF58 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC21.2■□□□□ 0.99
Col19a1Q0VF58 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.99
Col19a1Q0VF58 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
Col19a1Q0VF58 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
Col19a1Q0VF58 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Col19a1Q0VF58 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC21.2■□□□□ 0.98
Col19a1Q0VF58 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Col19a1Q0VF58 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC21.2■□□□□ 0.98
Col19a1Q0VF58 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC21.2■□□□□ 0.98
Col19a1Q0VF58 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC21.2■□□□□ 0.98
Col19a1Q0VF58 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Col19a1Q0VF58 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC21.2■□□□□ 0.98
Col19a1Q0VF58 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
Col19a1Q0VF58 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Col19a1Q0VF58 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.98
Col19a1Q0VF58 Gm43403-201ENSMUST00000198011 1786 ntBASIC21.2■□□□□ 0.98
Col19a1Q0VF58 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Col19a1Q0VF58 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC21.19■□□□□ 0.98
Col19a1Q0VF58 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC21.19■□□□□ 0.98
Col19a1Q0VF58 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC21.19■□□□□ 0.98
Col19a1Q0VF58 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Col19a1Q0VF58 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC21.19■□□□□ 0.98
Col19a1Q0VF58 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC21.19■□□□□ 0.98
Col19a1Q0VF58 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Col19a1Q0VF58 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Col19a1Q0VF58 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Col19a1Q0VF58 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Col19a1Q0VF58 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Col19a1Q0VF58 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Col19a1Q0VF58 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Col19a1Q0VF58 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC21.18■□□□□ 0.98
Col19a1Q0VF58 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC21.18■□□□□ 0.98
Col19a1Q0VF58 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Col19a1Q0VF58 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Col19a1Q0VF58 Gm37563-201ENSMUST00000192580 1513 ntBASIC21.18■□□□□ 0.98
Col19a1Q0VF58 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Col19a1Q0VF58 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Col19a1Q0VF58 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
Col19a1Q0VF58 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Col19a1Q0VF58 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Col19a1Q0VF58 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Col19a1Q0VF58 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Col19a1Q0VF58 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Col19a1Q0VF58 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Col19a1Q0VF58 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
Col19a1Q0VF58 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
Col19a1Q0VF58 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Col19a1Q0VF58 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Col19a1Q0VF58 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC21.16■□□□□ 0.98
Col19a1Q0VF58 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
Col19a1Q0VF58 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
Col19a1Q0VF58 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Col19a1Q0VF58 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Col19a1Q0VF58 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Col19a1Q0VF58 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Col19a1Q0VF58 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC21.15■□□□□ 0.98
Col19a1Q0VF58 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC21.15■□□□□ 0.98
Col19a1Q0VF58 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC21.15■□□□□ 0.98
Col19a1Q0VF58 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
Col19a1Q0VF58 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC21.15■□□□□ 0.98
Col19a1Q0VF58 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC21.15■□□□□ 0.98
Retrieved 100 of 76,532 protein–RNA pairs in 21 ms