Protein–RNA interactions for Protein: Q05722

Col9a1, Collagen alpha-1(IX) chain, mousemouse

Predictions only

Length 921 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col9a1Q05722 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Col9a1Q05722 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Col9a1Q05722 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Col9a1Q05722 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Col9a1Q05722 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC19.5■□□□□ 0.71
Col9a1Q05722 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
Col9a1Q05722 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
Col9a1Q05722 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Col9a1Q05722 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
Col9a1Q05722 Alkbh1-212ENSMUST00000185301 408 ntBASIC19.49■□□□□ 0.71
Col9a1Q05722 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC19.49■□□□□ 0.71
Col9a1Q05722 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Col9a1Q05722 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Col9a1Q05722 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Col9a1Q05722 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Col9a1Q05722 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
Col9a1Q05722 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC19.48■□□□□ 0.71
Col9a1Q05722 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
Col9a1Q05722 Gm13146-201ENSMUST00000118508 780 ntBASIC19.48■□□□□ 0.71
Col9a1Q05722 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC19.48■□□□□ 0.71
Col9a1Q05722 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Col9a1Q05722 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Col9a1Q05722 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC19.48■□□□□ 0.71
Col9a1Q05722 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Col9a1Q05722 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Col9a1Q05722 Gm27045-201ENSMUST00000182145 1402 ntBASIC19.48■□□□□ 0.71
Col9a1Q05722 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Col9a1Q05722 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
Col9a1Q05722 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Col9a1Q05722 Piga-208ENSMUST00000208697 947 ntTSL 5 BASIC19.47■□□□□ 0.71
Col9a1Q05722 Gm32031-203ENSMUST00000208993 649 ntTSL 2 BASIC19.47■□□□□ 0.71
Col9a1Q05722 AC133598.3-202ENSMUST00000224219 531 ntBASIC19.47■□□□□ 0.71
Col9a1Q05722 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Col9a1Q05722 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC19.46■□□□□ 0.71
Col9a1Q05722 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
Col9a1Q05722 Gm28819-201ENSMUST00000186691 572 ntTSL 5 BASIC19.46■□□□□ 0.71
Col9a1Q05722 Gm28840-208ENSMUST00000191514 738 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Col9a1Q05722 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Col9a1Q05722 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC19.46■□□□□ 0.71
Col9a1Q05722 Atg101-201ENSMUST00000048393 1230 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Col9a1Q05722 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Col9a1Q05722 AC115037.1-201ENSMUST00000223391 2173 ntBASIC19.46■□□□□ 0.71
Col9a1Q05722 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Col9a1Q05722 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Col9a1Q05722 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Col9a1Q05722 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC19.45■□□□□ 0.7
Col9a1Q05722 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Col9a1Q05722 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Col9a1Q05722 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC19.45■□□□□ 0.7
Col9a1Q05722 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Col9a1Q05722 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
Col9a1Q05722 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Col9a1Q05722 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Col9a1Q05722 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Col9a1Q05722 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Col9a1Q05722 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
Col9a1Q05722 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC19.44■□□□□ 0.7
Col9a1Q05722 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Col9a1Q05722 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Col9a1Q05722 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Col9a1Q05722 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Col9a1Q05722 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Col9a1Q05722 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC19.43■□□□□ 0.7
Col9a1Q05722 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Col9a1Q05722 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Col9a1Q05722 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Col9a1Q05722 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Col9a1Q05722 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
Col9a1Q05722 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
Col9a1Q05722 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Col9a1Q05722 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Col9a1Q05722 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Col9a1Q05722 Gm10698-201ENSMUST00000182663 604 ntBASIC19.42■□□□□ 0.7
Col9a1Q05722 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC19.42■□□□□ 0.7
Col9a1Q05722 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Col9a1Q05722 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Col9a1Q05722 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC19.42■□□□□ 0.7
Col9a1Q05722 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Col9a1Q05722 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Col9a1Q05722 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Col9a1Q05722 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC19.41■□□□□ 0.7
Col9a1Q05722 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC19.41■□□□□ 0.7
Col9a1Q05722 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Col9a1Q05722 Gm5417-201ENSMUST00000079706 384 ntBASIC19.41■□□□□ 0.7
Col9a1Q05722 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
Col9a1Q05722 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC19.41■□□□□ 0.7
Col9a1Q05722 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
Col9a1Q05722 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Col9a1Q05722 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Col9a1Q05722 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Col9a1Q05722 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Col9a1Q05722 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Col9a1Q05722 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC19.4■□□□□ 0.7
Col9a1Q05722 AC130713.1-201ENSMUST00000228853 1096 ntBASIC19.4■□□□□ 0.7
Col9a1Q05722 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Col9a1Q05722 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Col9a1Q05722 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
Col9a1Q05722 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC19.4■□□□□ 0.7
Col9a1Q05722 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Col9a1Q05722 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 51.2 ms