Protein–RNA interactions for Protein: Q04742

Emx1, Homeobox protein EMX1, mousemouse

Predictions only

Length 257 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Emx1Q04742 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
Emx1Q04742 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Emx1Q04742 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Emx1Q04742 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Emx1Q04742 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Emx1Q04742 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Emx1Q04742 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
Emx1Q04742 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC18.22■□□□□ 0.51
Emx1Q04742 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC18.22■□□□□ 0.51
Emx1Q04742 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Emx1Q04742 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Emx1Q04742 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Emx1Q04742 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Emx1Q04742 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Emx1Q04742 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Emx1Q04742 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC18.21■□□□□ 0.51
Emx1Q04742 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC18.21■□□□□ 0.51
Emx1Q04742 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC18.21■□□□□ 0.51
Emx1Q04742 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Emx1Q04742 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Emx1Q04742 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC18.21■□□□□ 0.51
Emx1Q04742 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Emx1Q04742 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
Emx1Q04742 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Emx1Q04742 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC18.2■□□□□ 0.5
Emx1Q04742 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Emx1Q04742 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC18.2■□□□□ 0.5
Emx1Q04742 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Emx1Q04742 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Emx1Q04742 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Emx1Q04742 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Emx1Q04742 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC18.19■□□□□ 0.5
Emx1Q04742 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Emx1Q04742 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC18.19■□□□□ 0.5
Emx1Q04742 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
Emx1Q04742 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
Emx1Q04742 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Emx1Q04742 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC18.19■□□□□ 0.5
Emx1Q04742 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Emx1Q04742 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Emx1Q04742 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Emx1Q04742 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Emx1Q04742 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Emx1Q04742 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC18.19■□□□□ 0.5
Emx1Q04742 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
Emx1Q04742 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Emx1Q04742 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Emx1Q04742 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Emx1Q04742 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Emx1Q04742 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
Emx1Q04742 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Emx1Q04742 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Emx1Q04742 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Emx1Q04742 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
Emx1Q04742 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Emx1Q04742 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Emx1Q04742 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Emx1Q04742 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Emx1Q04742 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
Emx1Q04742 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
Emx1Q04742 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Emx1Q04742 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
Emx1Q04742 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
Emx1Q04742 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
Emx1Q04742 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
Emx1Q04742 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Emx1Q04742 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Emx1Q04742 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Emx1Q04742 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
Emx1Q04742 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Emx1Q04742 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Emx1Q04742 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC18.17■□□□□ 0.5
Emx1Q04742 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
Emx1Q04742 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC18.17■□□□□ 0.5
Emx1Q04742 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Emx1Q04742 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Emx1Q04742 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Emx1Q04742 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Emx1Q04742 Gm12922-201ENSMUST00000120626 809 ntBASIC18.16■□□□□ 0.5
Emx1Q04742 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Emx1Q04742 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Emx1Q04742 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Emx1Q04742 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Emx1Q04742 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
Emx1Q04742 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Emx1Q04742 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Emx1Q04742 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Emx1Q04742 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Emx1Q04742 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.5
Emx1Q04742 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Emx1Q04742 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Emx1Q04742 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC18.14■□□□□ 0.49
Emx1Q04742 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Emx1Q04742 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
Emx1Q04742 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Emx1Q04742 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Emx1Q04742 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC18.14■□□□□ 0.49
Emx1Q04742 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Emx1Q04742 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Emx1Q04742 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC18.14■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 19.6 ms