Protein–RNA interactions for Protein: P98083

Shc1, SHC-transforming protein 1, mousemouse

Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shc1P98083 Iqck-206ENSMUST00000208658 2891 ntBASIC17.66■□□□□ 0.42
Shc1P98083 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
Shc1P98083 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Shc1P98083 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC17.66■□□□□ 0.42
Shc1P98083 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Shc1P98083 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
Shc1P98083 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Shc1P98083 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Shc1P98083 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
Shc1P98083 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Shc1P98083 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
Shc1P98083 Gm43909-201ENSMUST00000203443 1876 ntBASIC17.65■□□□□ 0.42
Shc1P98083 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC17.65■□□□□ 0.42
Shc1P98083 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Shc1P98083 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC17.65■□□□□ 0.42
Shc1P98083 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Shc1P98083 Cdkn3-203ENSMUST00000227149 1952 ntBASIC17.65■□□□□ 0.42
Shc1P98083 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Shc1P98083 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Shc1P98083 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Shc1P98083 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.42
Shc1P98083 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Shc1P98083 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Shc1P98083 Gm15043-201ENSMUST00000118843 1543 ntBASIC17.64■□□□□ 0.41
Shc1P98083 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC17.64■□□□□ 0.41
Shc1P98083 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Shc1P98083 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC17.64■□□□□ 0.41
Shc1P98083 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Shc1P98083 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Shc1P98083 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Shc1P98083 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Shc1P98083 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
Shc1P98083 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
Shc1P98083 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Shc1P98083 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Shc1P98083 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
Shc1P98083 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Shc1P98083 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Shc1P98083 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
Shc1P98083 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC17.63■□□□□ 0.41
Shc1P98083 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
Shc1P98083 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC17.63■□□□□ 0.41
Shc1P98083 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Shc1P98083 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Shc1P98083 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
Shc1P98083 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC17.62■□□□□ 0.41
Shc1P98083 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Shc1P98083 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Shc1P98083 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Shc1P98083 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC17.62■□□□□ 0.41
Shc1P98083 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
Shc1P98083 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC17.62■□□□□ 0.41
Shc1P98083 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
Shc1P98083 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Shc1P98083 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Shc1P98083 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
Shc1P98083 AC165080.2-201ENSMUST00000217491 1530 ntBASIC17.62■□□□□ 0.41
Shc1P98083 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Shc1P98083 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
Shc1P98083 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC17.61■□□□□ 0.41
Shc1P98083 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Shc1P98083 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
Shc1P98083 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC17.61■□□□□ 0.41
Shc1P98083 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
Shc1P98083 Serp2-204ENSMUST00000228055 705 ntBASIC17.61■□□□□ 0.41
Shc1P98083 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Shc1P98083 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC17.61■□□□□ 0.41
Shc1P98083 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC17.61■□□□□ 0.41
Shc1P98083 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC17.61■□□□□ 0.41
Shc1P98083 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Shc1P98083 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
Shc1P98083 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
Shc1P98083 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC17.6■□□□□ 0.41
Shc1P98083 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC17.6■□□□□ 0.41
Shc1P98083 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
Shc1P98083 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Shc1P98083 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Shc1P98083 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Shc1P98083 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Shc1P98083 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
Shc1P98083 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
Shc1P98083 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
Shc1P98083 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC17.59■□□□□ 0.41
Shc1P98083 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Shc1P98083 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Shc1P98083 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Shc1P98083 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Shc1P98083 Gm2011-201ENSMUST00000203124 1263 ntBASIC17.59■□□□□ 0.41
Shc1P98083 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Shc1P98083 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Shc1P98083 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC17.59■□□□□ 0.41
Shc1P98083 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
Shc1P98083 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC17.58■□□□□ 0.41
Shc1P98083 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Shc1P98083 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Shc1P98083 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Shc1P98083 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Shc1P98083 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Shc1P98083 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC17.58■□□□□ 0.4
Shc1P98083 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 31.2 ms