Protein–RNA interactions for Protein: P97503

Nkx3-2, Homeobox protein Nkx-3.2, mousemouse

Predictions only

Length 333 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx3-2P97503 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Nkx3-2P97503 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC18.51■□□□□ 0.55
Nkx3-2P97503 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Nkx3-2P97503 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Nkx3-2P97503 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC18.5■□□□□ 0.55
Nkx3-2P97503 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC18.5■□□□□ 0.55
Nkx3-2P97503 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Nkx3-2P97503 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Nkx3-2P97503 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Nkx3-2P97503 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Nkx3-2P97503 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Nkx3-2P97503 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Nkx3-2P97503 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Nkx3-2P97503 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Nkx3-2P97503 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Nkx3-2P97503 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Nkx3-2P97503 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Nkx3-2P97503 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
Nkx3-2P97503 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Nkx3-2P97503 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Nkx3-2P97503 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Nkx3-2P97503 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Nkx3-2P97503 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Nkx3-2P97503 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Nkx3-2P97503 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC18.47■□□□□ 0.55
Nkx3-2P97503 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Nkx3-2P97503 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Nkx3-2P97503 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
Nkx3-2P97503 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Nkx3-2P97503 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC18.47■□□□□ 0.55
Nkx3-2P97503 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Nkx3-2P97503 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Nkx3-2P97503 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Nkx3-2P97503 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
Nkx3-2P97503 Gm5874-201ENSMUST00000096101 508 ntBASIC18.46■□□□□ 0.55
Nkx3-2P97503 Gm10493-201ENSMUST00000097270 612 ntBASIC18.46■□□□□ 0.55
Nkx3-2P97503 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Nkx3-2P97503 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC18.46■□□□□ 0.55
Nkx3-2P97503 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Nkx3-2P97503 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Nkx3-2P97503 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Nkx3-2P97503 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Nkx3-2P97503 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Nkx3-2P97503 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Nkx3-2P97503 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
Nkx3-2P97503 AC165080.2-201ENSMUST00000217491 1530 ntBASIC18.45■□□□□ 0.54
Nkx3-2P97503 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Nkx3-2P97503 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Nkx3-2P97503 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Nkx3-2P97503 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Nkx3-2P97503 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC18.45■□□□□ 0.54
Nkx3-2P97503 Slc35b2-207ENSMUST00000226086 850 ntBASIC18.45■□□□□ 0.54
Nkx3-2P97503 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Nkx3-2P97503 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC18.45■□□□□ 0.54
Nkx3-2P97503 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Nkx3-2P97503 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Nkx3-2P97503 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC18.44■□□□□ 0.54
Nkx3-2P97503 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Nkx3-2P97503 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC18.44■□□□□ 0.54
Nkx3-2P97503 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Nkx3-2P97503 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC18.44■□□□□ 0.54
Nkx3-2P97503 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC18.44■□□□□ 0.54
Nkx3-2P97503 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
Nkx3-2P97503 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Nkx3-2P97503 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Nkx3-2P97503 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Nkx3-2P97503 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Nkx3-2P97503 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
Nkx3-2P97503 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Nkx3-2P97503 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Nkx3-2P97503 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Nkx3-2P97503 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Nkx3-2P97503 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC18.42■□□□□ 0.54
Nkx3-2P97503 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Nkx3-2P97503 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Nkx3-2P97503 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC18.42■□□□□ 0.54
Nkx3-2P97503 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Nkx3-2P97503 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Nkx3-2P97503 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Nkx3-2P97503 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC18.42■□□□□ 0.54
Nkx3-2P97503 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Nkx3-2P97503 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Nkx3-2P97503 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Nkx3-2P97503 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Nkx3-2P97503 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Nkx3-2P97503 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
Nkx3-2P97503 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Nkx3-2P97503 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Nkx3-2P97503 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
Nkx3-2P97503 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Nkx3-2P97503 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC18.4■□□□□ 0.54
Nkx3-2P97503 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Nkx3-2P97503 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Nkx3-2P97503 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Nkx3-2P97503 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC18.4■□□□□ 0.54
Nkx3-2P97503 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
Nkx3-2P97503 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Nkx3-2P97503 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
Nkx3-2P97503 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Nkx3-2P97503 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Retrieved 100 of 76,532 protein–RNA pairs in 29 ms