Protein–RNA interactions for Protein: P97326

Cdh6, Cadherin-6, mousemouse

Predictions only

Length 790 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh6P97326 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Cdh6P97326 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Cdh6P97326 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Cdh6P97326 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
Cdh6P97326 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Cdh6P97326 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
Cdh6P97326 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC19.95■□□□□ 0.78
Cdh6P97326 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Cdh6P97326 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Cdh6P97326 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Cdh6P97326 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
Cdh6P97326 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Cdh6P97326 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC19.94■□□□□ 0.78
Cdh6P97326 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
Cdh6P97326 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Cdh6P97326 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Cdh6P97326 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
Cdh6P97326 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Cdh6P97326 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC19.93■□□□□ 0.78
Cdh6P97326 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Cdh6P97326 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Cdh6P97326 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Cdh6P97326 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
Cdh6P97326 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC19.93■□□□□ 0.78
Cdh6P97326 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Cdh6P97326 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Cdh6P97326 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Cdh6P97326 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC19.93■□□□□ 0.78
Cdh6P97326 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC19.92■□□□□ 0.78
Cdh6P97326 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
Cdh6P97326 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Cdh6P97326 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC19.92■□□□□ 0.78
Cdh6P97326 Gm8493-201ENSMUST00000196881 489 ntBASIC19.92■□□□□ 0.78
Cdh6P97326 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Cdh6P97326 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Cdh6P97326 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC19.92■□□□□ 0.78
Cdh6P97326 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Cdh6P97326 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Cdh6P97326 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Cdh6P97326 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Cdh6P97326 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Cdh6P97326 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Cdh6P97326 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Cdh6P97326 Flvcr1-202ENSMUST00000191946 1216 ntBASIC19.91■□□□□ 0.78
Cdh6P97326 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Cdh6P97326 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC19.91■□□□□ 0.78
Cdh6P97326 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC19.91■□□□□ 0.78
Cdh6P97326 Gm34220-201ENSMUST00000223001 2709 ntBASIC19.91■□□□□ 0.78
Cdh6P97326 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Cdh6P97326 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC19.91■□□□□ 0.78
Cdh6P97326 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Cdh6P97326 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Cdh6P97326 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Cdh6P97326 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Cdh6P97326 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Cdh6P97326 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC19.9■□□□□ 0.78
Cdh6P97326 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC19.9■□□□□ 0.78
Cdh6P97326 Gm6139-201ENSMUST00000079261 882 ntBASIC19.9■□□□□ 0.78
Cdh6P97326 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Cdh6P97326 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Cdh6P97326 AA386476-201ENSMUST00000098781 1665 ntBASIC19.9■□□□□ 0.78
Cdh6P97326 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Cdh6P97326 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Cdh6P97326 Gm43173-201ENSMUST00000202246 593 ntBASIC19.89■□□□□ 0.77
Cdh6P97326 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC19.89■□□□□ 0.77
Cdh6P97326 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Cdh6P97326 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Cdh6P97326 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
Cdh6P97326 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Cdh6P97326 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Cdh6P97326 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC19.88■□□□□ 0.77
Cdh6P97326 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Cdh6P97326 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Cdh6P97326 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Cdh6P97326 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Cdh6P97326 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC19.87■□□□□ 0.77
Cdh6P97326 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Cdh6P97326 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Cdh6P97326 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Cdh6P97326 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Cdh6P97326 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Cdh6P97326 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Cdh6P97326 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Cdh6P97326 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Cdh6P97326 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Cdh6P97326 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Cdh6P97326 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Cdh6P97326 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Cdh6P97326 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Cdh6P97326 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC19.86■□□□□ 0.77
Cdh6P97326 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Cdh6P97326 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Cdh6P97326 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Cdh6P97326 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Cdh6P97326 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Cdh6P97326 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
Cdh6P97326 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Cdh6P97326 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Cdh6P97326 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC19.85■□□□□ 0.77
Cdh6P97326 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Retrieved 100 of 76,532 protein–RNA pairs in 36.7 ms