Protein–RNA interactions for Protein: P84228

Hist1h3b, Histone H3.2, mousemouse

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hist1h3bP84228 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
Hist1h3bP84228 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Hist1h3bP84228 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Hist1h3bP84228 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Hist1h3bP84228 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Hist1h3bP84228 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC17.22■□□□□ 0.35
Hist1h3bP84228 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC17.22■□□□□ 0.35
Hist1h3bP84228 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Hist1h3bP84228 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Hist1h3bP84228 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC17.22■□□□□ 0.35
Hist1h3bP84228 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
Hist1h3bP84228 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Hist1h3bP84228 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Hist1h3bP84228 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Hist1h3bP84228 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Hist1h3bP84228 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Hist1h3bP84228 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Hist1h3bP84228 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Hist1h3bP84228 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC17.21■□□□□ 0.35
Hist1h3bP84228 Gm9847-201ENSMUST00000052528 599 ntBASIC17.21■□□□□ 0.35
Hist1h3bP84228 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC17.21■□□□□ 0.35
Hist1h3bP84228 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Hist1h3bP84228 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Hist1h3bP84228 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Hist1h3bP84228 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Hist1h3bP84228 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
Hist1h3bP84228 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Hist1h3bP84228 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Hist1h3bP84228 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Hist1h3bP84228 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Hist1h3bP84228 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
Hist1h3bP84228 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Hist1h3bP84228 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Hist1h3bP84228 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
Hist1h3bP84228 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Hist1h3bP84228 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Hist1h3bP84228 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC17.19■□□□□ 0.34
Hist1h3bP84228 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Hist1h3bP84228 Gm9207-201ENSMUST00000198773 1115 ntBASIC17.19■□□□□ 0.34
Hist1h3bP84228 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC17.19■□□□□ 0.34
Hist1h3bP84228 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC17.19■□□□□ 0.34
Hist1h3bP84228 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Hist1h3bP84228 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Hist1h3bP84228 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Hist1h3bP84228 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC17.18■□□□□ 0.34
Hist1h3bP84228 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Hist1h3bP84228 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC17.18■□□□□ 0.34
Hist1h3bP84228 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC17.18■□□□□ 0.34
Hist1h3bP84228 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Hist1h3bP84228 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Hist1h3bP84228 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Hist1h3bP84228 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC17.18■□□□□ 0.34
Hist1h3bP84228 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC17.18■□□□□ 0.34
Hist1h3bP84228 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
Hist1h3bP84228 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Hist1h3bP84228 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Hist1h3bP84228 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
Hist1h3bP84228 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Hist1h3bP84228 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
Hist1h3bP84228 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC17.17■□□□□ 0.34
Hist1h3bP84228 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Hist1h3bP84228 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Hist1h3bP84228 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC17.17■□□□□ 0.34
Hist1h3bP84228 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Hist1h3bP84228 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC17.17■□□□□ 0.34
Hist1h3bP84228 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Hist1h3bP84228 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Hist1h3bP84228 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Hist1h3bP84228 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
Hist1h3bP84228 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Hist1h3bP84228 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Hist1h3bP84228 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Hist1h3bP84228 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
Hist1h3bP84228 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Hist1h3bP84228 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
Hist1h3bP84228 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Hist1h3bP84228 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Hist1h3bP84228 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC17.15■□□□□ 0.34
Hist1h3bP84228 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Hist1h3bP84228 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
Hist1h3bP84228 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Hist1h3bP84228 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Hist1h3bP84228 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Hist1h3bP84228 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Hist1h3bP84228 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Hist1h3bP84228 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Hist1h3bP84228 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Hist1h3bP84228 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Hist1h3bP84228 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Hist1h3bP84228 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Hist1h3bP84228 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Hist1h3bP84228 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC17.14■□□□□ 0.33
Hist1h3bP84228 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Hist1h3bP84228 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC17.13■□□□□ 0.33
Hist1h3bP84228 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Hist1h3bP84228 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC17.13■□□□□ 0.33
Hist1h3bP84228 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC17.13■□□□□ 0.33
Hist1h3bP84228 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Hist1h3bP84228 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Hist1h3bP84228 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 16.6 ms