Protein–RNA interactions for Protein: P70662

Ldb1, LIM domain-binding protein 1, mousemouse

Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ldb1P70662 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Ldb1P70662 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Ldb1P70662 Gm6085-201ENSMUST00000182774 1470 ntBASIC19.57■□□□□ 0.72
Ldb1P70662 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Ldb1P70662 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Ldb1P70662 AC140930.3-201ENSMUST00000222935 274 ntBASIC19.57■□□□□ 0.72
Ldb1P70662 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Ldb1P70662 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
Ldb1P70662 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Ldb1P70662 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Ldb1P70662 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Ldb1P70662 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Ldb1P70662 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Ldb1P70662 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC19.56■□□□□ 0.72
Ldb1P70662 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Ldb1P70662 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Ldb1P70662 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Ldb1P70662 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Ldb1P70662 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC19.55■□□□□ 0.72
Ldb1P70662 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Ldb1P70662 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
Ldb1P70662 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Ldb1P70662 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC19.55■□□□□ 0.72
Ldb1P70662 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Ldb1P70662 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Ldb1P70662 Gm43545-201ENSMUST00000196765 2779 ntBASIC19.55■□□□□ 0.72
Ldb1P70662 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Ldb1P70662 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC19.54■□□□□ 0.72
Ldb1P70662 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Ldb1P70662 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Ldb1P70662 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Ldb1P70662 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Ldb1P70662 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC19.54■□□□□ 0.72
Ldb1P70662 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Ldb1P70662 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
Ldb1P70662 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Ldb1P70662 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Ldb1P70662 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
Ldb1P70662 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
Ldb1P70662 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC19.53■□□□□ 0.72
Ldb1P70662 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
Ldb1P70662 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Ldb1P70662 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Ldb1P70662 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Ldb1P70662 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Ldb1P70662 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Ldb1P70662 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Ldb1P70662 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
Ldb1P70662 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Ldb1P70662 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Ldb1P70662 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Ldb1P70662 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Ldb1P70662 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Ldb1P70662 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC19.52■□□□□ 0.72
Ldb1P70662 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Ldb1P70662 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Ldb1P70662 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.71
Ldb1P70662 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.71
Ldb1P70662 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Ldb1P70662 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Ldb1P70662 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Ldb1P70662 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Ldb1P70662 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Ldb1P70662 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC19.51■□□□□ 0.71
Ldb1P70662 Iqck-206ENSMUST00000208658 2891 ntBASIC19.5■□□□□ 0.71
Ldb1P70662 Gm20100-201ENSMUST00000209418 2272 ntBASIC19.5■□□□□ 0.71
Ldb1P70662 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC19.5■□□□□ 0.71
Ldb1P70662 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Ldb1P70662 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Ldb1P70662 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Ldb1P70662 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC19.5■□□□□ 0.71
Ldb1P70662 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
Ldb1P70662 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Ldb1P70662 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Ldb1P70662 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC19.5■□□□□ 0.71
Ldb1P70662 Gm13241-201ENSMUST00000094493 780 ntBASIC19.5■□□□□ 0.71
Ldb1P70662 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC19.5■□□□□ 0.71
Ldb1P70662 Gm43034-201ENSMUST00000198678 1364 ntBASIC19.49■□□□□ 0.71
Ldb1P70662 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Ldb1P70662 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Ldb1P70662 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Ldb1P70662 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC19.49■□□□□ 0.71
Ldb1P70662 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC19.49■□□□□ 0.71
Ldb1P70662 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Ldb1P70662 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Ldb1P70662 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
Ldb1P70662 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC19.49■□□□□ 0.71
Ldb1P70662 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Ldb1P70662 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Ldb1P70662 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Ldb1P70662 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Ldb1P70662 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Ldb1P70662 Gm43137-201ENSMUST00000198052 594 ntBASIC19.48■□□□□ 0.71
Ldb1P70662 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC19.48■□□□□ 0.71
Ldb1P70662 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
Ldb1P70662 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC19.48■□□□□ 0.71
Ldb1P70662 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Ldb1P70662 Hsf1-204ENSMUST00000226872 2104 ntBASIC19.48■□□□□ 0.71
Ldb1P70662 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Ldb1P70662 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
Retrieved 100 of 76,532 protein–RNA pairs in 41.8 ms