Protein–RNA interactions for Protein: P70390

Shox2, Short stature homeobox protein 2, mousemouse

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shox2P70390 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Shox2P70390 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Shox2P70390 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Shox2P70390 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Shox2P70390 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC19.51■□□□□ 0.71
Shox2P70390 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC19.51■□□□□ 0.71
Shox2P70390 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Shox2P70390 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Shox2P70390 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
Shox2P70390 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Shox2P70390 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
Shox2P70390 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Shox2P70390 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Shox2P70390 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Shox2P70390 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC19.51■□□□□ 0.71
Shox2P70390 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
Shox2P70390 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC19.5■□□□□ 0.71
Shox2P70390 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Shox2P70390 Gm16437-201ENSMUST00000025669 507 ntBASIC19.5■□□□□ 0.71
Shox2P70390 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Shox2P70390 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Shox2P70390 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
Shox2P70390 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Shox2P70390 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Shox2P70390 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Shox2P70390 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Shox2P70390 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Shox2P70390 Scarna2-201ENSMUST00000157560 414 ntBASIC19.49■□□□□ 0.71
Shox2P70390 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
Shox2P70390 Gm6311-201ENSMUST00000073790 878 ntBASIC19.49■□□□□ 0.71
Shox2P70390 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Shox2P70390 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC19.49■□□□□ 0.71
Shox2P70390 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Shox2P70390 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Shox2P70390 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC19.48■□□□□ 0.71
Shox2P70390 Gm42939-201ENSMUST00000197514 2205 ntBASIC19.48■□□□□ 0.71
Shox2P70390 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Shox2P70390 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Shox2P70390 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
Shox2P70390 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
Shox2P70390 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
Shox2P70390 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
Shox2P70390 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
Shox2P70390 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Shox2P70390 Gm9885-202ENSMUST00000186234 2209 ntBASIC19.48■□□□□ 0.71
Shox2P70390 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Shox2P70390 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC19.47■□□□□ 0.71
Shox2P70390 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Shox2P70390 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC19.47■□□□□ 0.71
Shox2P70390 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Shox2P70390 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Shox2P70390 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Shox2P70390 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC19.47■□□□□ 0.71
Shox2P70390 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
Shox2P70390 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Shox2P70390 Gm20100-201ENSMUST00000209418 2272 ntBASIC19.46■□□□□ 0.71
Shox2P70390 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Shox2P70390 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
Shox2P70390 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Shox2P70390 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Shox2P70390 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Shox2P70390 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
Shox2P70390 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC19.46■□□□□ 0.71
Shox2P70390 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Shox2P70390 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Shox2P70390 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
Shox2P70390 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Shox2P70390 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Shox2P70390 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Shox2P70390 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Shox2P70390 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC19.45■□□□□ 0.7
Shox2P70390 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC19.45■□□□□ 0.7
Shox2P70390 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
Shox2P70390 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC19.45■□□□□ 0.7
Shox2P70390 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Shox2P70390 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Shox2P70390 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
Shox2P70390 Dmtn-210ENSMUST00000228824 2377 ntBASIC19.45■□□□□ 0.7
Shox2P70390 Gm28536-201ENSMUST00000190971 1317 ntBASIC19.45■□□□□ 0.7
Shox2P70390 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Shox2P70390 Gm45640-201ENSMUST00000210665 1896 ntBASIC19.44■□□□□ 0.7
Shox2P70390 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC19.44■□□□□ 0.7
Shox2P70390 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC19.44■□□□□ 0.7
Shox2P70390 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Shox2P70390 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
Shox2P70390 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
Shox2P70390 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Shox2P70390 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Shox2P70390 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Shox2P70390 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC19.44■□□□□ 0.7
Shox2P70390 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Shox2P70390 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Shox2P70390 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Shox2P70390 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Shox2P70390 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Shox2P70390 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
Shox2P70390 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Shox2P70390 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Shox2P70390 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Shox2P70390 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 19.2 ms