Protein–RNA interactions for Protein: P63006

Lhx1, LIM/homeobox protein Lhx1, mousemouse

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lhx1P63006 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Lhx1P63006 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC19.36■□□□□ 0.69
Lhx1P63006 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Lhx1P63006 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Lhx1P63006 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Lhx1P63006 Gm10493-201ENSMUST00000097270 612 ntBASIC19.35■□□□□ 0.69
Lhx1P63006 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Lhx1P63006 Cdkn3-203ENSMUST00000227149 1952 ntBASIC19.35■□□□□ 0.69
Lhx1P63006 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Lhx1P63006 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC19.35■□□□□ 0.69
Lhx1P63006 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Lhx1P63006 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC19.34■□□□□ 0.69
Lhx1P63006 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Lhx1P63006 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
Lhx1P63006 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC19.34■□□□□ 0.69
Lhx1P63006 Gm5874-201ENSMUST00000096101 508 ntBASIC19.34■□□□□ 0.69
Lhx1P63006 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
Lhx1P63006 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Lhx1P63006 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Lhx1P63006 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC19.33■□□□□ 0.69
Lhx1P63006 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Lhx1P63006 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.69
Lhx1P63006 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC19.33■□□□□ 0.68
Lhx1P63006 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC19.33■□□□□ 0.68
Lhx1P63006 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC19.33■□□□□ 0.68
Lhx1P63006 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Lhx1P63006 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Lhx1P63006 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Lhx1P63006 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Lhx1P63006 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC19.33■□□□□ 0.68
Lhx1P63006 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Lhx1P63006 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Lhx1P63006 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Lhx1P63006 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Lhx1P63006 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Lhx1P63006 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Lhx1P63006 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Lhx1P63006 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
Lhx1P63006 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Lhx1P63006 AA386476-201ENSMUST00000098781 1665 ntBASIC19.31■□□□□ 0.68
Lhx1P63006 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
Lhx1P63006 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC19.31■□□□□ 0.68
Lhx1P63006 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC19.31■□□□□ 0.68
Lhx1P63006 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC19.31■□□□□ 0.68
Lhx1P63006 Gm27801-201ENSMUST00000184174 223 ntBASIC19.31■□□□□ 0.68
Lhx1P63006 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC19.31■□□□□ 0.68
Lhx1P63006 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Lhx1P63006 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Lhx1P63006 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Lhx1P63006 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Lhx1P63006 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Lhx1P63006 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC19.3■□□□□ 0.68
Lhx1P63006 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Lhx1P63006 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Lhx1P63006 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Lhx1P63006 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Lhx1P63006 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Lhx1P63006 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC19.29■□□□□ 0.68
Lhx1P63006 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Lhx1P63006 AC154266.1-201ENSMUST00000223190 503 ntBASIC19.29■□□□□ 0.68
Lhx1P63006 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Lhx1P63006 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Lhx1P63006 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
Lhx1P63006 Gm10129-202ENSMUST00000193100 1316 ntBASIC19.28■□□□□ 0.68
Lhx1P63006 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Lhx1P63006 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Lhx1P63006 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Lhx1P63006 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Lhx1P63006 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Lhx1P63006 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Lhx1P63006 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Lhx1P63006 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Lhx1P63006 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Lhx1P63006 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Lhx1P63006 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Lhx1P63006 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
Lhx1P63006 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
Lhx1P63006 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Lhx1P63006 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Lhx1P63006 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Lhx1P63006 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Lhx1P63006 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Lhx1P63006 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Lhx1P63006 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Lhx1P63006 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC19.26■□□□□ 0.67
Lhx1P63006 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Lhx1P63006 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Lhx1P63006 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Lhx1P63006 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC19.26■□□□□ 0.67
Lhx1P63006 AC099934.2-201ENSMUST00000196389 70 ntBASIC19.26■□□□□ 0.67
Lhx1P63006 AC156953.1-201ENSMUST00000196953 70 ntBASIC19.26■□□□□ 0.67
Lhx1P63006 AC157822.2-201ENSMUST00000200291 70 ntBASIC19.26■□□□□ 0.67
Lhx1P63006 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Lhx1P63006 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
Lhx1P63006 Gm43909-201ENSMUST00000203443 1876 ntBASIC19.26■□□□□ 0.67
Lhx1P63006 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Lhx1P63006 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Lhx1P63006 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
Lhx1P63006 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Lhx1P63006 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 26.1 ms