Protein–RNA interactions for Protein: P62960

Ybx1, Nuclease-sensitive element-binding protein 1, mousemouse

Known RBP Predictions only

Length 322 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ybx1P62960 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
Ybx1P62960 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Ybx1P62960 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC20.22■□□□□ 0.83
Ybx1P62960 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Ybx1P62960 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
Ybx1P62960 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Ybx1P62960 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Ybx1P62960 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Ybx1P62960 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Ybx1P62960 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Ybx1P62960 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Ybx1P62960 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC20.21■□□□□ 0.83
Ybx1P62960 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC20.21■□□□□ 0.83
Ybx1P62960 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Ybx1P62960 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Ybx1P62960 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Ybx1P62960 Gm12933-201ENSMUST00000120203 872 ntBASIC20.2■□□□□ 0.82
Ybx1P62960 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
Ybx1P62960 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Ybx1P62960 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Ybx1P62960 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Ybx1P62960 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Ybx1P62960 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Ybx1P62960 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Ybx1P62960 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Ybx1P62960 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Ybx1P62960 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Ybx1P62960 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Ybx1P62960 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Ybx1P62960 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Ybx1P62960 Gm10571-201ENSMUST00000097869 1638 ntBASIC20.19■□□□□ 0.82
Ybx1P62960 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC20.19■□□□□ 0.82
Ybx1P62960 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Ybx1P62960 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Ybx1P62960 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Ybx1P62960 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
Ybx1P62960 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC20.18■□□□□ 0.82
Ybx1P62960 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Ybx1P62960 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Ybx1P62960 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC20.18■□□□□ 0.82
Ybx1P62960 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
Ybx1P62960 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Ybx1P62960 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC20.17■□□□□ 0.82
Ybx1P62960 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
Ybx1P62960 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC20.17■□□□□ 0.82
Ybx1P62960 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Ybx1P62960 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Ybx1P62960 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Ybx1P62960 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Ybx1P62960 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Ybx1P62960 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Ybx1P62960 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Ybx1P62960 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
Ybx1P62960 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
Ybx1P62960 Gm7514-201ENSMUST00000209475 934 ntBASIC20.16■□□□□ 0.82
Ybx1P62960 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Ybx1P62960 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Ybx1P62960 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Ybx1P62960 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
Ybx1P62960 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC20.15■□□□□ 0.82
Ybx1P62960 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Ybx1P62960 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC20.15■□□□□ 0.82
Ybx1P62960 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Ybx1P62960 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Ybx1P62960 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Ybx1P62960 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Ybx1P62960 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Ybx1P62960 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Ybx1P62960 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
Ybx1P62960 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Ybx1P62960 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Ybx1P62960 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Ybx1P62960 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Ybx1P62960 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
Ybx1P62960 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.81
Ybx1P62960 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC20.14■□□□□ 0.81
Ybx1P62960 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Ybx1P62960 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Ybx1P62960 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Ybx1P62960 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Ybx1P62960 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Ybx1P62960 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Ybx1P62960 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC20.13■□□□□ 0.81
Ybx1P62960 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Ybx1P62960 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC20.13■□□□□ 0.81
Ybx1P62960 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC20.13■□□□□ 0.81
Ybx1P62960 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Ybx1P62960 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC20.13■□□□□ 0.81
Ybx1P62960 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Ybx1P62960 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Ybx1P62960 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
Ybx1P62960 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Ybx1P62960 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC20.12■□□□□ 0.81
Ybx1P62960 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Ybx1P62960 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC20.12■□□□□ 0.81
Ybx1P62960 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Ybx1P62960 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Ybx1P62960 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Ybx1P62960 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Ybx1P62960 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC20.11■□□□□ 0.81
Retrieved 100 of 76,532 protein–RNA pairs in 46.4 ms