Protein–RNA interactions for Protein: P62315

Snrpd1, Small nuclear ribonucleoprotein Sm D1, mousemouse

Known RBP Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snrpd1P62315 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Snrpd1P62315 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
Snrpd1P62315 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC19.72■□□□□ 0.75
Snrpd1P62315 Gm38160-201ENSMUST00000193090 2499 ntBASIC19.72■□□□□ 0.75
Snrpd1P62315 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Snrpd1P62315 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Snrpd1P62315 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Snrpd1P62315 Gm10571-201ENSMUST00000097869 1638 ntBASIC19.72■□□□□ 0.75
Snrpd1P62315 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Snrpd1P62315 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC19.71■□□□□ 0.75
Snrpd1P62315 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
Snrpd1P62315 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Snrpd1P62315 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Snrpd1P62315 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
Snrpd1P62315 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Snrpd1P62315 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Snrpd1P62315 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Snrpd1P62315 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC19.7■□□□□ 0.74
Snrpd1P62315 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Snrpd1P62315 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Snrpd1P62315 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Snrpd1P62315 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Snrpd1P62315 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC19.7■□□□□ 0.74
Snrpd1P62315 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Snrpd1P62315 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC19.69■□□□□ 0.74
Snrpd1P62315 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Snrpd1P62315 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Snrpd1P62315 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Snrpd1P62315 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
Snrpd1P62315 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
Snrpd1P62315 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC19.69■□□□□ 0.74
Snrpd1P62315 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC19.69■□□□□ 0.74
Snrpd1P62315 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC19.69■□□□□ 0.74
Snrpd1P62315 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC19.69■□□□□ 0.74
Snrpd1P62315 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Snrpd1P62315 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Snrpd1P62315 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Snrpd1P62315 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
Snrpd1P62315 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Snrpd1P62315 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Snrpd1P62315 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Snrpd1P62315 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Snrpd1P62315 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Snrpd1P62315 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
Snrpd1P62315 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC19.68■□□□□ 0.74
Snrpd1P62315 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Snrpd1P62315 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC19.68■□□□□ 0.74
Snrpd1P62315 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
Snrpd1P62315 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Snrpd1P62315 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
Snrpd1P62315 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Snrpd1P62315 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Snrpd1P62315 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Snrpd1P62315 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Snrpd1P62315 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
Snrpd1P62315 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
Snrpd1P62315 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC19.67■□□□□ 0.74
Snrpd1P62315 Gm18284-201ENSMUST00000172604 624 ntBASIC19.67■□□□□ 0.74
Snrpd1P62315 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC19.67■□□□□ 0.74
Snrpd1P62315 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Snrpd1P62315 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Snrpd1P62315 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
Snrpd1P62315 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Snrpd1P62315 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Snrpd1P62315 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC19.67■□□□□ 0.74
Snrpd1P62315 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Snrpd1P62315 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
Snrpd1P62315 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Snrpd1P62315 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Snrpd1P62315 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Snrpd1P62315 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Snrpd1P62315 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Snrpd1P62315 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
Snrpd1P62315 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC19.66■□□□□ 0.74
Snrpd1P62315 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Snrpd1P62315 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Snrpd1P62315 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
Snrpd1P62315 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
Snrpd1P62315 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Snrpd1P62315 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Snrpd1P62315 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Snrpd1P62315 AA386476-201ENSMUST00000098781 1665 ntBASIC19.65■□□□□ 0.74
Snrpd1P62315 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Snrpd1P62315 Gm43909-201ENSMUST00000203443 1876 ntBASIC19.65■□□□□ 0.74
Snrpd1P62315 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC19.65■□□□□ 0.74
Snrpd1P62315 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Snrpd1P62315 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Snrpd1P62315 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Snrpd1P62315 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
Snrpd1P62315 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Snrpd1P62315 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Snrpd1P62315 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC19.64■□□□□ 0.74
Snrpd1P62315 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
Snrpd1P62315 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Snrpd1P62315 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Snrpd1P62315 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Snrpd1P62315 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC19.63■□□□□ 0.73
Snrpd1P62315 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Snrpd1P62315 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Snrpd1P62315 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 25.1 ms