Protein–RNA interactions for Protein: P62313

Lsm6, U6 snRNA-associated Sm-like protein LSm6, mousemouse

Known RBP Predictions only

Length 80 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm6P62313 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.34
Lsm6P62313 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC17.2■□□□□ 0.34
Lsm6P62313 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Lsm6P62313 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC17.2■□□□□ 0.34
Lsm6P62313 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Lsm6P62313 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Lsm6P62313 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
Lsm6P62313 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Lsm6P62313 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Lsm6P62313 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Lsm6P62313 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Lsm6P62313 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
Lsm6P62313 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Lsm6P62313 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC17.19■□□□□ 0.34
Lsm6P62313 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Lsm6P62313 Gm13241-201ENSMUST00000094493 780 ntBASIC17.19■□□□□ 0.34
Lsm6P62313 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Lsm6P62313 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Lsm6P62313 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Lsm6P62313 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Lsm6P62313 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Lsm6P62313 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Lsm6P62313 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Lsm6P62313 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Lsm6P62313 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Lsm6P62313 AA386476-201ENSMUST00000098781 1665 ntBASIC17.18■□□□□ 0.34
Lsm6P62313 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Lsm6P62313 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
Lsm6P62313 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC17.18■□□□□ 0.34
Lsm6P62313 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Lsm6P62313 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC17.18■□□□□ 0.34
Lsm6P62313 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Lsm6P62313 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Lsm6P62313 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Lsm6P62313 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Lsm6P62313 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Lsm6P62313 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Lsm6P62313 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Lsm6P62313 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Lsm6P62313 Gm5576-201ENSMUST00000075809 1236 ntBASIC17.17■□□□□ 0.34
Lsm6P62313 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Lsm6P62313 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Lsm6P62313 Gm10209-201ENSMUST00000203397 1607 ntBASIC17.17■□□□□ 0.34
Lsm6P62313 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Lsm6P62313 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC17.17■□□□□ 0.34
Lsm6P62313 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Lsm6P62313 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC17.17■□□□□ 0.34
Lsm6P62313 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Lsm6P62313 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Lsm6P62313 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Lsm6P62313 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Lsm6P62313 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
Lsm6P62313 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC17.16■□□□□ 0.34
Lsm6P62313 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Lsm6P62313 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC17.16■□□□□ 0.34
Lsm6P62313 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
Lsm6P62313 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Lsm6P62313 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Lsm6P62313 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC17.16■□□□□ 0.34
Lsm6P62313 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Lsm6P62313 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC17.15■□□□□ 0.34
Lsm6P62313 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Lsm6P62313 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Lsm6P62313 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC17.15■□□□□ 0.34
Lsm6P62313 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
Lsm6P62313 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Lsm6P62313 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC17.15■□□□□ 0.34
Lsm6P62313 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Lsm6P62313 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Lsm6P62313 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Lsm6P62313 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Lsm6P62313 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Lsm6P62313 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Lsm6P62313 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Lsm6P62313 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Lsm6P62313 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Lsm6P62313 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Lsm6P62313 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Lsm6P62313 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Lsm6P62313 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Lsm6P62313 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC17.14■□□□□ 0.33
Lsm6P62313 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
Lsm6P62313 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Lsm6P62313 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Lsm6P62313 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Lsm6P62313 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Lsm6P62313 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC17.13■□□□□ 0.33
Lsm6P62313 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Lsm6P62313 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Lsm6P62313 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC17.13■□□□□ 0.33
Lsm6P62313 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC17.13■□□□□ 0.33
Lsm6P62313 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
Lsm6P62313 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
Lsm6P62313 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Lsm6P62313 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Lsm6P62313 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Lsm6P62313 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Lsm6P62313 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Lsm6P62313 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Lsm6P62313 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 28 ms