Protein–RNA interactions for Protein: P61620

Sec61a1, Protein transport protein Sec61 subunit alpha isoform 1, mousemouse

Known RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61a1P61620 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Sec61a1P61620 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Sec61a1P61620 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Sec61a1P61620 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Sec61a1P61620 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Sec61a1P61620 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
Sec61a1P61620 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Sec61a1P61620 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC17.16■□□□□ 0.34
Sec61a1P61620 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
Sec61a1P61620 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Sec61a1P61620 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Sec61a1P61620 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Sec61a1P61620 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Sec61a1P61620 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Sec61a1P61620 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Sec61a1P61620 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Sec61a1P61620 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Sec61a1P61620 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Sec61a1P61620 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Sec61a1P61620 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Sec61a1P61620 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Sec61a1P61620 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Sec61a1P61620 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Sec61a1P61620 Gm9847-201ENSMUST00000052528 599 ntBASIC17.15■□□□□ 0.34
Sec61a1P61620 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Sec61a1P61620 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Sec61a1P61620 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Sec61a1P61620 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Sec61a1P61620 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Sec61a1P61620 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Sec61a1P61620 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Sec61a1P61620 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Sec61a1P61620 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC17.14■□□□□ 0.33
Sec61a1P61620 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC17.14■□□□□ 0.33
Sec61a1P61620 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
Sec61a1P61620 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Sec61a1P61620 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Sec61a1P61620 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Sec61a1P61620 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC17.14■□□□□ 0.33
Sec61a1P61620 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Sec61a1P61620 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Sec61a1P61620 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Sec61a1P61620 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
Sec61a1P61620 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Sec61a1P61620 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Sec61a1P61620 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Sec61a1P61620 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Sec61a1P61620 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC17.13■□□□□ 0.33
Sec61a1P61620 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC17.13■□□□□ 0.33
Sec61a1P61620 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Sec61a1P61620 Gm21956-201ENSMUST00000179946 522 ntBASIC17.13■□□□□ 0.33
Sec61a1P61620 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
Sec61a1P61620 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Sec61a1P61620 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Sec61a1P61620 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Sec61a1P61620 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Sec61a1P61620 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Sec61a1P61620 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Sec61a1P61620 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Sec61a1P61620 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Sec61a1P61620 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Sec61a1P61620 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Sec61a1P61620 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
Sec61a1P61620 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Sec61a1P61620 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
Sec61a1P61620 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Sec61a1P61620 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Sec61a1P61620 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Sec61a1P61620 Gm13241-201ENSMUST00000094493 780 ntBASIC17.12■□□□□ 0.33
Sec61a1P61620 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Sec61a1P61620 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Sec61a1P61620 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Sec61a1P61620 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Sec61a1P61620 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Sec61a1P61620 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC17.12■□□□□ 0.33
Sec61a1P61620 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Sec61a1P61620 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Sec61a1P61620 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Sec61a1P61620 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC17.11■□□□□ 0.33
Sec61a1P61620 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Sec61a1P61620 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Sec61a1P61620 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Sec61a1P61620 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC17.11■□□□□ 0.33
Sec61a1P61620 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Sec61a1P61620 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Sec61a1P61620 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Sec61a1P61620 AC122428.2-201ENSMUST00000216321 1832 ntBASIC17.1■□□□□ 0.33
Sec61a1P61620 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Sec61a1P61620 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC17.1■□□□□ 0.33
Sec61a1P61620 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Sec61a1P61620 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC17.1■□□□□ 0.33
Sec61a1P61620 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC17.1■□□□□ 0.33
Sec61a1P61620 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC17.1■□□□□ 0.33
Sec61a1P61620 Gm37035-201ENSMUST00000194809 2148 ntBASIC17.1■□□□□ 0.33
Sec61a1P61620 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC17.1■□□□□ 0.33
Sec61a1P61620 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC17.1■□□□□ 0.33
Sec61a1P61620 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Sec61a1P61620 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC17.1■□□□□ 0.33
Sec61a1P61620 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Sec61a1P61620 Gm43034-201ENSMUST00000198678 1364 ntBASIC17.1■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 66.6 ms