Protein–RNA interactions for Protein: P56726

Smo, Smoothened homolog, mousemouse

Predictions only

Length 793 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SmoP56726 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
SmoP56726 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
SmoP56726 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC19.82■□□□□ 0.76
SmoP56726 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
SmoP56726 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC19.82■□□□□ 0.76
SmoP56726 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
SmoP56726 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
SmoP56726 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
SmoP56726 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
SmoP56726 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
SmoP56726 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
SmoP56726 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
SmoP56726 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
SmoP56726 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
SmoP56726 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
SmoP56726 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
SmoP56726 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
SmoP56726 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
SmoP56726 AA386476-201ENSMUST00000098781 1665 ntBASIC19.81■□□□□ 0.76
SmoP56726 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
SmoP56726 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
SmoP56726 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
SmoP56726 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
SmoP56726 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
SmoP56726 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
SmoP56726 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
SmoP56726 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
SmoP56726 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC19.8■□□□□ 0.76
SmoP56726 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC19.8■□□□□ 0.76
SmoP56726 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC19.8■□□□□ 0.76
SmoP56726 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
SmoP56726 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
SmoP56726 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
SmoP56726 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
SmoP56726 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
SmoP56726 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
SmoP56726 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
SmoP56726 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
SmoP56726 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
SmoP56726 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
SmoP56726 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
SmoP56726 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
SmoP56726 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
SmoP56726 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
SmoP56726 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
SmoP56726 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC19.79■□□□□ 0.76
SmoP56726 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
SmoP56726 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC19.79■□□□□ 0.76
SmoP56726 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
SmoP56726 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
SmoP56726 Gm10493-201ENSMUST00000097270 612 ntBASIC19.79■□□□□ 0.76
SmoP56726 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
SmoP56726 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC19.79■□□□□ 0.76
SmoP56726 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
SmoP56726 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
SmoP56726 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
SmoP56726 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
SmoP56726 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC19.78■□□□□ 0.76
SmoP56726 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
SmoP56726 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
SmoP56726 Gm5874-201ENSMUST00000096101 508 ntBASIC19.78■□□□□ 0.76
SmoP56726 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
SmoP56726 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
SmoP56726 Gm10129-202ENSMUST00000193100 1316 ntBASIC19.77■□□□□ 0.76
SmoP56726 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
SmoP56726 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC19.77■□□□□ 0.76
SmoP56726 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
SmoP56726 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
SmoP56726 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
SmoP56726 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SmoP56726 Gm6802-201ENSMUST00000167843 1983 ntBASIC19.76■□□□□ 0.75
SmoP56726 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
SmoP56726 AC154266.1-201ENSMUST00000223190 503 ntBASIC19.76■□□□□ 0.75
SmoP56726 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SmoP56726 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SmoP56726 Gm42911-201ENSMUST00000199360 1630 ntBASIC19.76■□□□□ 0.75
SmoP56726 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
SmoP56726 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SmoP56726 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
SmoP56726 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
SmoP56726 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC19.75■□□□□ 0.75
SmoP56726 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
SmoP56726 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
SmoP56726 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC19.75■□□□□ 0.75
SmoP56726 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
SmoP56726 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC19.75■□□□□ 0.75
SmoP56726 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
SmoP56726 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
SmoP56726 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC19.74■□□□□ 0.75
SmoP56726 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SmoP56726 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
SmoP56726 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC19.74■□□□□ 0.75
SmoP56726 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC19.74■□□□□ 0.75
SmoP56726 Gm27801-201ENSMUST00000184174 223 ntBASIC19.74■□□□□ 0.75
SmoP56726 Hsf1-207ENSMUST00000228371 2102 ntBASIC19.74■□□□□ 0.75
SmoP56726 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SmoP56726 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SmoP56726 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC19.74■□□□□ 0.75
SmoP56726 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
SmoP56726 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Retrieved 100 of 76,532 protein–RNA pairs in 20.6 ms