Protein–RNA interactions for Protein: P55271

Cdkn2b, Cyclin-dependent kinase 4 inhibitor B, mousemouse

Predictions only

Length 130 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdkn2bP55271 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Cdkn2bP55271 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
Cdkn2bP55271 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
Cdkn2bP55271 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Cdkn2bP55271 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC18.83■□□□□ 0.61
Cdkn2bP55271 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Cdkn2bP55271 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
Cdkn2bP55271 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC18.83■□□□□ 0.6
Cdkn2bP55271 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Cdkn2bP55271 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC18.83■□□□□ 0.6
Cdkn2bP55271 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Cdkn2bP55271 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Cdkn2bP55271 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
Cdkn2bP55271 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Cdkn2bP55271 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Cdkn2bP55271 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Cdkn2bP55271 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC18.82■□□□□ 0.6
Cdkn2bP55271 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Cdkn2bP55271 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Cdkn2bP55271 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Cdkn2bP55271 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Cdkn2bP55271 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
Cdkn2bP55271 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
Cdkn2bP55271 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
Cdkn2bP55271 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Cdkn2bP55271 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Cdkn2bP55271 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Cdkn2bP55271 Golph3-205ENSMUST00000228671 2842 ntBASIC18.82■□□□□ 0.6
Cdkn2bP55271 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC18.82■□□□□ 0.6
Cdkn2bP55271 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Cdkn2bP55271 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Cdkn2bP55271 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Cdkn2bP55271 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Cdkn2bP55271 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
Cdkn2bP55271 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC18.81■□□□□ 0.6
Cdkn2bP55271 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Cdkn2bP55271 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Cdkn2bP55271 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
Cdkn2bP55271 Etf1-202ENSMUST00000180351 108 ntBASIC18.81■□□□□ 0.6
Cdkn2bP55271 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Cdkn2bP55271 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Cdkn2bP55271 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Cdkn2bP55271 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
Cdkn2bP55271 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Cdkn2bP55271 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Cdkn2bP55271 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Cdkn2bP55271 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Cdkn2bP55271 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
Cdkn2bP55271 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Cdkn2bP55271 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Cdkn2bP55271 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC18.8■□□□□ 0.6
Cdkn2bP55271 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Cdkn2bP55271 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Cdkn2bP55271 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Cdkn2bP55271 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Cdkn2bP55271 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC18.79■□□□□ 0.6
Cdkn2bP55271 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC18.79■□□□□ 0.6
Cdkn2bP55271 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Cdkn2bP55271 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Cdkn2bP55271 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Cdkn2bP55271 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Cdkn2bP55271 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Cdkn2bP55271 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Cdkn2bP55271 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
Cdkn2bP55271 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Cdkn2bP55271 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Cdkn2bP55271 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC18.78■□□□□ 0.6
Cdkn2bP55271 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Cdkn2bP55271 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC18.78■□□□□ 0.6
Cdkn2bP55271 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC18.78■□□□□ 0.6
Cdkn2bP55271 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Cdkn2bP55271 Gm5784-201ENSMUST00000179344 2478 ntBASIC18.78■□□□□ 0.6
Cdkn2bP55271 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC18.78■□□□□ 0.6
Cdkn2bP55271 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Cdkn2bP55271 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
Cdkn2bP55271 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Cdkn2bP55271 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Cdkn2bP55271 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Cdkn2bP55271 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Cdkn2bP55271 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Cdkn2bP55271 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
Cdkn2bP55271 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Cdkn2bP55271 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Cdkn2bP55271 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC18.77■□□□□ 0.6
Cdkn2bP55271 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
Cdkn2bP55271 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Cdkn2bP55271 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
Cdkn2bP55271 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
Cdkn2bP55271 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Cdkn2bP55271 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Cdkn2bP55271 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Cdkn2bP55271 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
Cdkn2bP55271 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.59
Cdkn2bP55271 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
Cdkn2bP55271 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
Cdkn2bP55271 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Cdkn2bP55271 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Cdkn2bP55271 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Cdkn2bP55271 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Cdkn2bP55271 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 32.4 ms