Protein–RNA interactions for Protein: P55066

Ncan, Neurocan core protein, mousemouse

Predictions only

Length 1,268 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NcanP55066 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
NcanP55066 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
NcanP55066 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC21.06■□□□□ 0.96
NcanP55066 Gm27741-201ENSMUST00000185060 237 ntBASIC21.06■□□□□ 0.96
NcanP55066 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC21.06■□□□□ 0.96
NcanP55066 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC21.05■□□□□ 0.96
NcanP55066 Gsg1-201ENSMUST00000087729 1307 ntAPPRIS P4 TSL 1 (best) BASIC21.05■□□□□ 0.96
NcanP55066 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
NcanP55066 Gm18101-201ENSMUST00000215769 548 ntBASIC21.05■□□□□ 0.96
NcanP55066 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
NcanP55066 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
NcanP55066 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
NcanP55066 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
NcanP55066 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
NcanP55066 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
NcanP55066 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC21.04■□□□□ 0.96
NcanP55066 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC21.04■□□□□ 0.96
NcanP55066 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC21.04■□□□□ 0.96
NcanP55066 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
NcanP55066 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC21.04■□□□□ 0.96
NcanP55066 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
NcanP55066 Gm43403-201ENSMUST00000198011 1786 ntBASIC21.03■□□□□ 0.96
NcanP55066 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
NcanP55066 Gm13534-201ENSMUST00000121169 513 ntBASIC21.03■□□□□ 0.96
NcanP55066 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
NcanP55066 Faap20-210ENSMUST00000178473 1076 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
NcanP55066 Gm26524-201ENSMUST00000192339 390 ntBASIC21.03■□□□□ 0.96
NcanP55066 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
NcanP55066 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.96
NcanP55066 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
NcanP55066 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
NcanP55066 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC21.02■□□□□ 0.96
NcanP55066 Gm6576-201ENSMUST00000169678 883 ntBASIC21.02■□□□□ 0.96
NcanP55066 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
NcanP55066 Gm21362-201ENSMUST00000194272 928 ntBASIC21.02■□□□□ 0.96
NcanP55066 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
NcanP55066 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
NcanP55066 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
NcanP55066 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
NcanP55066 AL672049.1-201ENSMUST00000197943 91 ntBASIC21.01■□□□□ 0.95
NcanP55066 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
NcanP55066 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
NcanP55066 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
NcanP55066 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC21.01■□□□□ 0.95
NcanP55066 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
NcanP55066 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
NcanP55066 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
NcanP55066 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC21■□□□□ 0.95
NcanP55066 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
NcanP55066 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
NcanP55066 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC21■□□□□ 0.95
NcanP55066 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC21■□□□□ 0.95
NcanP55066 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC21■□□□□ 0.95
NcanP55066 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC21■□□□□ 0.95
NcanP55066 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
NcanP55066 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC21■□□□□ 0.95
NcanP55066 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
NcanP55066 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
NcanP55066 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC20.99■□□□□ 0.95
NcanP55066 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC20.99■□□□□ 0.95
NcanP55066 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
NcanP55066 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
NcanP55066 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
NcanP55066 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
NcanP55066 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC20.98■□□□□ 0.95
NcanP55066 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
NcanP55066 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC20.98■□□□□ 0.95
NcanP55066 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
NcanP55066 AC121577.1-201ENSMUST00000227302 707 ntBASIC20.98■□□□□ 0.95
NcanP55066 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
NcanP55066 Il17rd-202ENSMUST00000223942 2186 ntBASIC20.97■□□□□ 0.95
NcanP55066 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
NcanP55066 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
NcanP55066 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
NcanP55066 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
NcanP55066 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
NcanP55066 Gm25925-201ENSMUST00000158314 306 ntBASIC20.97■□□□□ 0.95
NcanP55066 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
NcanP55066 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
NcanP55066 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
NcanP55066 Gm5913-201ENSMUST00000119397 1399 ntBASIC20.97■□□□□ 0.95
NcanP55066 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
NcanP55066 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
NcanP55066 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
NcanP55066 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC20.96■□□□□ 0.95
NcanP55066 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
NcanP55066 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
NcanP55066 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
NcanP55066 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC20.95■□□□□ 0.94
NcanP55066 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
NcanP55066 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
NcanP55066 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC20.95■□□□□ 0.94
NcanP55066 Arhgef33-211ENSMUST00000225658 473 ntBASIC20.95■□□□□ 0.94
NcanP55066 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC20.95■□□□□ 0.94
NcanP55066 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
NcanP55066 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
NcanP55066 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
NcanP55066 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
NcanP55066 Smim12-201ENSMUST00000142029 1022 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
NcanP55066 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Retrieved 100 of 76,532 protein–RNA pairs in 32.5 ms