Protein–RNA interactions for Protein: P54276

Msh6, DNA mismatch repair protein Msh6, mousemouse

Known RBP Predictions only

Length 1,358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh6P54276 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC25.22■■□□□ 1.63
Msh6P54276 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
Msh6P54276 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC25.21■■□□□ 1.63
Msh6P54276 Gm27801-201ENSMUST00000184174 223 ntBASIC25.21■■□□□ 1.63
Msh6P54276 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC25.21■■□□□ 1.63
Msh6P54276 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
Msh6P54276 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC25.21■■□□□ 1.63
Msh6P54276 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
Msh6P54276 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC25.2■■□□□ 1.63
Msh6P54276 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC25.2■■□□□ 1.63
Msh6P54276 Ap3s1-204ENSMUST00000225520 957 ntBASIC25.2■■□□□ 1.63
Msh6P54276 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC25.2■■□□□ 1.63
Msh6P54276 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC25.2■■□□□ 1.63
Msh6P54276 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC25.2■■□□□ 1.63
Msh6P54276 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC25.2■■□□□ 1.62
Msh6P54276 Gm43006-201ENSMUST00000197702 1602 ntBASIC25.2■■□□□ 1.62
Msh6P54276 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC25.19■■□□□ 1.62
Msh6P54276 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
Msh6P54276 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC25.19■■□□□ 1.62
Msh6P54276 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
Msh6P54276 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC25.19■■□□□ 1.62
Msh6P54276 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC25.19■■□□□ 1.62
Msh6P54276 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC25.19■■□□□ 1.62
Msh6P54276 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
Msh6P54276 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC25.18■■□□□ 1.62
Msh6P54276 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
Msh6P54276 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC25.17■■□□□ 1.62
Msh6P54276 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC25.17■■□□□ 1.62
Msh6P54276 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC25.17■■□□□ 1.62
Msh6P54276 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
Msh6P54276 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC25.17■■□□□ 1.62
Msh6P54276 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC25.17■■□□□ 1.62
Msh6P54276 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC25.17■■□□□ 1.62
Msh6P54276 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
Msh6P54276 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC25.16■■□□□ 1.62
Msh6P54276 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC25.16■■□□□ 1.62
Msh6P54276 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
Msh6P54276 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
Msh6P54276 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
Msh6P54276 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC25.16■■□□□ 1.62
Msh6P54276 Gm12441-201ENSMUST00000121806 588 ntBASIC25.16■■□□□ 1.62
Msh6P54276 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC25.16■■□□□ 1.62
Msh6P54276 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC25.16■■□□□ 1.62
Msh6P54276 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC25.16■■□□□ 1.62
Msh6P54276 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC25.15■■□□□ 1.62
Msh6P54276 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC25.15■■□□□ 1.62
Msh6P54276 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
Msh6P54276 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
Msh6P54276 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC25.15■■□□□ 1.62
Msh6P54276 Nespas-201ENSMUST00000143738 1083 ntBASIC25.15■■□□□ 1.62
Msh6P54276 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
Msh6P54276 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC25.15■■□□□ 1.62
Msh6P54276 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC25.14■■□□□ 1.62
Msh6P54276 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.62
Msh6P54276 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC25.14■■□□□ 1.62
Msh6P54276 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.62
Msh6P54276 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC25.14■■□□□ 1.62
Msh6P54276 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC25.14■■□□□ 1.61
Msh6P54276 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC25.14■■□□□ 1.61
Msh6P54276 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC25.14■■□□□ 1.61
Msh6P54276 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC25.14■■□□□ 1.61
Msh6P54276 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.61
Msh6P54276 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC25.13■■□□□ 1.61
Msh6P54276 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC25.13■■□□□ 1.61
Msh6P54276 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
Msh6P54276 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC25.13■■□□□ 1.61
Msh6P54276 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
Msh6P54276 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
Msh6P54276 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
Msh6P54276 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC25.12■■□□□ 1.61
Msh6P54276 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC25.12■■□□□ 1.61
Msh6P54276 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC25.12■■□□□ 1.61
Msh6P54276 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC25.12■■□□□ 1.61
Msh6P54276 Gm10653-202ENSMUST00000139570 835 ntBASIC25.12■■□□□ 1.61
Msh6P54276 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC25.12■■□□□ 1.61
Msh6P54276 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC25.12■■□□□ 1.61
Msh6P54276 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC25.12■■□□□ 1.61
Msh6P54276 Gm7514-201ENSMUST00000209475 934 ntBASIC25.12■■□□□ 1.61
Msh6P54276 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
Msh6P54276 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC25.11■■□□□ 1.61
Msh6P54276 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC25.11■■□□□ 1.61
Msh6P54276 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC25.11■■□□□ 1.61
Msh6P54276 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC25.11■■□□□ 1.61
Msh6P54276 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC25.11■■□□□ 1.61
Msh6P54276 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
Msh6P54276 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
Msh6P54276 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
Msh6P54276 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC25.11■■□□□ 1.61
Msh6P54276 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC25.11■■□□□ 1.61
Msh6P54276 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC25.11■■□□□ 1.61
Msh6P54276 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC25.1■■□□□ 1.61
Msh6P54276 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC25.1■■□□□ 1.61
Msh6P54276 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
Msh6P54276 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
Msh6P54276 Gm42555-201ENSMUST00000199304 1039 ntBASIC25.1■■□□□ 1.61
Msh6P54276 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
Msh6P54276 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC25.1■■□□□ 1.61
Msh6P54276 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC25.1■■□□□ 1.61
Msh6P54276 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
Msh6P54276 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC25.1■■□□□ 1.61
Retrieved 100 of 76,532 protein–RNA pairs in 10.1 ms