Protein–RNA interactions for Protein: P53776

Lhx4, LIM/homeobox protein Lhx4, mousemouse

Predictions only

Length 390 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lhx4P53776 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Lhx4P53776 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
Lhx4P53776 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
Lhx4P53776 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Lhx4P53776 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Lhx4P53776 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Lhx4P53776 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Lhx4P53776 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Lhx4P53776 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Lhx4P53776 AC152827.1-201ENSMUST00000221143 2189 ntBASIC16.53■□□□□ 0.24
Lhx4P53776 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Lhx4P53776 Krt8-ps-201ENSMUST00000208495 945 ntBASIC16.53■□□□□ 0.24
Lhx4P53776 Gm45417-201ENSMUST00000209533 758 ntBASIC16.53■□□□□ 0.24
Lhx4P53776 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Lhx4P53776 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Lhx4P53776 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Lhx4P53776 AC166356.1-201ENSMUST00000228236 1426 ntBASIC16.53■□□□□ 0.24
Lhx4P53776 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
Lhx4P53776 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Lhx4P53776 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Lhx4P53776 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC16.52■□□□□ 0.24
Lhx4P53776 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Lhx4P53776 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC16.52■□□□□ 0.24
Lhx4P53776 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Lhx4P53776 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC16.52■□□□□ 0.23
Lhx4P53776 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Lhx4P53776 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.23
Lhx4P53776 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Lhx4P53776 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
Lhx4P53776 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC16.51■□□□□ 0.23
Lhx4P53776 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Lhx4P53776 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
Lhx4P53776 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
Lhx4P53776 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Lhx4P53776 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
Lhx4P53776 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Lhx4P53776 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC16.51■□□□□ 0.23
Lhx4P53776 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC16.51■□□□□ 0.23
Lhx4P53776 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Lhx4P53776 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Lhx4P53776 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Lhx4P53776 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Lhx4P53776 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Lhx4P53776 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Lhx4P53776 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Lhx4P53776 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Lhx4P53776 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Lhx4P53776 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Lhx4P53776 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
Lhx4P53776 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Lhx4P53776 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
Lhx4P53776 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Lhx4P53776 Gm8770-201ENSMUST00000121113 1109 ntBASIC16.5■□□□□ 0.23
Lhx4P53776 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
Lhx4P53776 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
Lhx4P53776 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
Lhx4P53776 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
Lhx4P53776 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Lhx4P53776 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Lhx4P53776 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Lhx4P53776 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Lhx4P53776 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Lhx4P53776 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC16.49■□□□□ 0.23
Lhx4P53776 Gm43530-201ENSMUST00000195920 274 ntBASIC16.49■□□□□ 0.23
Lhx4P53776 Gm43759-201ENSMUST00000196925 1261 ntBASIC16.49■□□□□ 0.23
Lhx4P53776 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Lhx4P53776 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Lhx4P53776 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
Lhx4P53776 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Lhx4P53776 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
Lhx4P53776 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Lhx4P53776 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Lhx4P53776 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Lhx4P53776 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Lhx4P53776 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Lhx4P53776 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Lhx4P53776 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Lhx4P53776 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC16.48■□□□□ 0.23
Lhx4P53776 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC16.48■□□□□ 0.23
Lhx4P53776 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Lhx4P53776 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Lhx4P53776 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
Lhx4P53776 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Lhx4P53776 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Lhx4P53776 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Lhx4P53776 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Lhx4P53776 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Lhx4P53776 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Lhx4P53776 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Lhx4P53776 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC16.47■□□□□ 0.23
Lhx4P53776 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC16.47■□□□□ 0.23
Lhx4P53776 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
Lhx4P53776 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
Lhx4P53776 Gm43137-201ENSMUST00000198052 594 ntBASIC16.47■□□□□ 0.23
Lhx4P53776 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC16.47■□□□□ 0.23
Lhx4P53776 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Lhx4P53776 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Lhx4P53776 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Lhx4P53776 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Lhx4P53776 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 15.7 ms