Protein–RNA interactions for Protein: P52946

Pdx1, Pancreas/duodenum homeobox protein 1, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdx1P52946 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Pdx1P52946 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Pdx1P52946 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Pdx1P52946 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Pdx1P52946 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Pdx1P52946 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Pdx1P52946 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Pdx1P52946 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
Pdx1P52946 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Pdx1P52946 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Pdx1P52946 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Pdx1P52946 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Pdx1P52946 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Pdx1P52946 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Pdx1P52946 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Pdx1P52946 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Pdx1P52946 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Pdx1P52946 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Pdx1P52946 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC19.44■□□□□ 0.7
Pdx1P52946 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Pdx1P52946 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
Pdx1P52946 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Pdx1P52946 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Pdx1P52946 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Pdx1P52946 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
Pdx1P52946 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Pdx1P52946 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Pdx1P52946 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Pdx1P52946 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC19.44■□□□□ 0.7
Pdx1P52946 Gm6139-201ENSMUST00000079261 882 ntBASIC19.44■□□□□ 0.7
Pdx1P52946 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Pdx1P52946 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC19.44■□□□□ 0.7
Pdx1P52946 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Pdx1P52946 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
Pdx1P52946 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Pdx1P52946 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC19.43■□□□□ 0.7
Pdx1P52946 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC19.43■□□□□ 0.7
Pdx1P52946 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Pdx1P52946 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Pdx1P52946 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Pdx1P52946 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Pdx1P52946 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Pdx1P52946 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC19.43■□□□□ 0.7
Pdx1P52946 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Pdx1P52946 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Pdx1P52946 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Pdx1P52946 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Pdx1P52946 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Pdx1P52946 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Pdx1P52946 Gm8493-201ENSMUST00000196881 489 ntBASIC19.42■□□□□ 0.7
Pdx1P52946 Gm43173-201ENSMUST00000202246 593 ntBASIC19.42■□□□□ 0.7
Pdx1P52946 Wdr70-203ENSMUST00000227371 1130 ntBASIC19.42■□□□□ 0.7
Pdx1P52946 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Pdx1P52946 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Pdx1P52946 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Pdx1P52946 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC19.42■□□□□ 0.7
Pdx1P52946 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
Pdx1P52946 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Pdx1P52946 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Pdx1P52946 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Pdx1P52946 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Pdx1P52946 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC19.41■□□□□ 0.7
Pdx1P52946 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Pdx1P52946 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Pdx1P52946 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC19.41■□□□□ 0.7
Pdx1P52946 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Pdx1P52946 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Pdx1P52946 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC19.41■□□□□ 0.7
Pdx1P52946 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC19.41■□□□□ 0.7
Pdx1P52946 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Pdx1P52946 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
Pdx1P52946 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC19.4■□□□□ 0.7
Pdx1P52946 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Pdx1P52946 Gm20634-201ENSMUST00000090779 2956 ntBASIC19.4■□□□□ 0.7
Pdx1P52946 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Pdx1P52946 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC19.4■□□□□ 0.7
Pdx1P52946 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Pdx1P52946 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Pdx1P52946 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Pdx1P52946 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Pdx1P52946 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Pdx1P52946 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Pdx1P52946 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC19.39■□□□□ 0.69
Pdx1P52946 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
Pdx1P52946 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Pdx1P52946 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC19.39■□□□□ 0.69
Pdx1P52946 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Pdx1P52946 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Pdx1P52946 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Pdx1P52946 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Pdx1P52946 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Pdx1P52946 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Pdx1P52946 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Pdx1P52946 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC19.38■□□□□ 0.69
Pdx1P52946 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC19.38■□□□□ 0.69
Pdx1P52946 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Pdx1P52946 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
Pdx1P52946 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Pdx1P52946 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Pdx1P52946 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 16.4 ms