Protein–RNA interactions for Protein: P50481

Lhx3, LIM/homeobox protein Lhx3, mousemouse

Predictions only

Length 400 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lhx3P50481 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Lhx3P50481 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Lhx3P50481 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
Lhx3P50481 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Lhx3P50481 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Lhx3P50481 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Lhx3P50481 Gm10571-201ENSMUST00000097869 1638 ntBASIC20.02■□□□□ 0.8
Lhx3P50481 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC20.02■□□□□ 0.8
Lhx3P50481 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC20.02■□□□□ 0.8
Lhx3P50481 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC20.02■□□□□ 0.8
Lhx3P50481 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Lhx3P50481 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Lhx3P50481 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
Lhx3P50481 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Lhx3P50481 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC20.01■□□□□ 0.79
Lhx3P50481 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
Lhx3P50481 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Lhx3P50481 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC20.01■□□□□ 0.79
Lhx3P50481 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Lhx3P50481 AC154266.1-201ENSMUST00000223190 503 ntBASIC20.01■□□□□ 0.79
Lhx3P50481 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
Lhx3P50481 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Lhx3P50481 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Lhx3P50481 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Lhx3P50481 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
Lhx3P50481 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Lhx3P50481 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
Lhx3P50481 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC20■□□□□ 0.79
Lhx3P50481 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
Lhx3P50481 Gm42911-201ENSMUST00000199360 1630 ntBASIC20■□□□□ 0.79
Lhx3P50481 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC20■□□□□ 0.79
Lhx3P50481 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC20■□□□□ 0.79
Lhx3P50481 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Lhx3P50481 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Lhx3P50481 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Lhx3P50481 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Lhx3P50481 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
Lhx3P50481 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
Lhx3P50481 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Lhx3P50481 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC19.99■□□□□ 0.79
Lhx3P50481 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC19.99■□□□□ 0.79
Lhx3P50481 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Lhx3P50481 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
Lhx3P50481 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC19.99■□□□□ 0.79
Lhx3P50481 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Lhx3P50481 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Lhx3P50481 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
Lhx3P50481 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Lhx3P50481 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Lhx3P50481 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Lhx3P50481 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Lhx3P50481 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Lhx3P50481 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Lhx3P50481 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Lhx3P50481 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Lhx3P50481 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC19.98■□□□□ 0.79
Lhx3P50481 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC19.98■□□□□ 0.79
Lhx3P50481 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC19.98■□□□□ 0.79
Lhx3P50481 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Lhx3P50481 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Lhx3P50481 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Lhx3P50481 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Lhx3P50481 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Lhx3P50481 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC19.97■□□□□ 0.79
Lhx3P50481 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC19.97■□□□□ 0.79
Lhx3P50481 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
Lhx3P50481 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Lhx3P50481 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Lhx3P50481 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Lhx3P50481 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC19.97■□□□□ 0.79
Lhx3P50481 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Lhx3P50481 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Lhx3P50481 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Lhx3P50481 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC19.96■□□□□ 0.79
Lhx3P50481 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
Lhx3P50481 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
Lhx3P50481 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Lhx3P50481 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Lhx3P50481 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Lhx3P50481 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Lhx3P50481 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.79
Lhx3P50481 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC19.95■□□□□ 0.78
Lhx3P50481 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Lhx3P50481 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Lhx3P50481 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Lhx3P50481 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
Lhx3P50481 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC19.95■□□□□ 0.78
Lhx3P50481 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Lhx3P50481 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC19.95■□□□□ 0.78
Lhx3P50481 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Lhx3P50481 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Lhx3P50481 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
Lhx3P50481 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Lhx3P50481 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Lhx3P50481 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC19.94■□□□□ 0.78
Lhx3P50481 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Lhx3P50481 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Lhx3P50481 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Lhx3P50481 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC19.93■□□□□ 0.78
Lhx3P50481 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC19.93■□□□□ 0.78
Retrieved 100 of 76,532 protein–RNA pairs in 47.7 ms