Protein–RNA interactions for Protein: P49698

Hnf4a, Hepatocyte nuclear factor 4-alpha, mousemouse

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hnf4aP49698 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Hnf4aP49698 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Hnf4aP49698 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Hnf4aP49698 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Hnf4aP49698 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Hnf4aP49698 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
Hnf4aP49698 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Hnf4aP49698 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC18.96■□□□□ 0.63
Hnf4aP49698 Gm9847-201ENSMUST00000052528 599 ntBASIC18.96■□□□□ 0.63
Hnf4aP49698 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC18.96■□□□□ 0.63
Hnf4aP49698 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Hnf4aP49698 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Hnf4aP49698 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Hnf4aP49698 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Hnf4aP49698 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC18.94■□□□□ 0.62
Hnf4aP49698 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Hnf4aP49698 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Hnf4aP49698 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Hnf4aP49698 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC18.94■□□□□ 0.62
Hnf4aP49698 Gm9207-201ENSMUST00000198773 1115 ntBASIC18.94■□□□□ 0.62
Hnf4aP49698 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Hnf4aP49698 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC18.94■□□□□ 0.62
Hnf4aP49698 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Hnf4aP49698 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Hnf4aP49698 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Hnf4aP49698 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Hnf4aP49698 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Hnf4aP49698 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Hnf4aP49698 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
Hnf4aP49698 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
Hnf4aP49698 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
Hnf4aP49698 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC18.93■□□□□ 0.62
Hnf4aP49698 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC18.93■□□□□ 0.62
Hnf4aP49698 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Hnf4aP49698 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Hnf4aP49698 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Hnf4aP49698 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC18.93■□□□□ 0.62
Hnf4aP49698 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC18.93■□□□□ 0.62
Hnf4aP49698 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Hnf4aP49698 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Hnf4aP49698 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC18.93■□□□□ 0.62
Hnf4aP49698 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Hnf4aP49698 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
Hnf4aP49698 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Hnf4aP49698 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Hnf4aP49698 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Hnf4aP49698 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC18.92■□□□□ 0.62
Hnf4aP49698 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC18.92■□□□□ 0.62
Hnf4aP49698 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Hnf4aP49698 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Hnf4aP49698 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Hnf4aP49698 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Hnf4aP49698 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC18.92■□□□□ 0.62
Hnf4aP49698 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
Hnf4aP49698 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Hnf4aP49698 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Hnf4aP49698 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
Hnf4aP49698 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Hnf4aP49698 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Hnf4aP49698 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC18.91■□□□□ 0.62
Hnf4aP49698 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Hnf4aP49698 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Hnf4aP49698 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Hnf4aP49698 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Hnf4aP49698 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
Hnf4aP49698 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Hnf4aP49698 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Hnf4aP49698 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Hnf4aP49698 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Hnf4aP49698 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Hnf4aP49698 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Hnf4aP49698 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC18.9■□□□□ 0.62
Hnf4aP49698 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
Hnf4aP49698 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Hnf4aP49698 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.62
Hnf4aP49698 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Hnf4aP49698 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Hnf4aP49698 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC18.89■□□□□ 0.61
Hnf4aP49698 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
Hnf4aP49698 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Hnf4aP49698 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC18.89■□□□□ 0.61
Hnf4aP49698 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
Hnf4aP49698 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Hnf4aP49698 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC18.89■□□□□ 0.61
Hnf4aP49698 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC18.89■□□□□ 0.61
Hnf4aP49698 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Hnf4aP49698 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Hnf4aP49698 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Hnf4aP49698 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Hnf4aP49698 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC18.88■□□□□ 0.61
Hnf4aP49698 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Hnf4aP49698 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC18.88■□□□□ 0.61
Hnf4aP49698 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Hnf4aP49698 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Hnf4aP49698 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Hnf4aP49698 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Hnf4aP49698 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Hnf4aP49698 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Hnf4aP49698 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Hnf4aP49698 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 39.4 ms