Protein–RNA interactions for Protein: P46467

Vps4b, Vacuolar protein sorting-associated protein 4B, mousemouse

Known RBP Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps4bP46467 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Vps4bP46467 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC19.88■□□□□ 0.77
Vps4bP46467 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Vps4bP46467 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Vps4bP46467 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Vps4bP46467 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Vps4bP46467 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Vps4bP46467 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Vps4bP46467 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Vps4bP46467 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC19.87■□□□□ 0.77
Vps4bP46467 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC19.87■□□□□ 0.77
Vps4bP46467 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC19.87■□□□□ 0.77
Vps4bP46467 Krt8-ps-201ENSMUST00000208495 945 ntBASIC19.87■□□□□ 0.77
Vps4bP46467 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC19.87■□□□□ 0.77
Vps4bP46467 Serp2-204ENSMUST00000228055 705 ntBASIC19.87■□□□□ 0.77
Vps4bP46467 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Vps4bP46467 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Vps4bP46467 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
Vps4bP46467 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Vps4bP46467 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Vps4bP46467 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
Vps4bP46467 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Vps4bP46467 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
Vps4bP46467 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC19.86■□□□□ 0.77
Vps4bP46467 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Vps4bP46467 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Vps4bP46467 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC19.86■□□□□ 0.77
Vps4bP46467 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
Vps4bP46467 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Vps4bP46467 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Vps4bP46467 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Vps4bP46467 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Vps4bP46467 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Vps4bP46467 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC19.85■□□□□ 0.77
Vps4bP46467 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
Vps4bP46467 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Vps4bP46467 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Vps4bP46467 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
Vps4bP46467 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Vps4bP46467 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC19.84■□□□□ 0.77
Vps4bP46467 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Vps4bP46467 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC19.84■□□□□ 0.77
Vps4bP46467 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
Vps4bP46467 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Vps4bP46467 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC19.84■□□□□ 0.77
Vps4bP46467 Gm43545-201ENSMUST00000196765 2779 ntBASIC19.84■□□□□ 0.77
Vps4bP46467 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Vps4bP46467 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Vps4bP46467 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Vps4bP46467 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Vps4bP46467 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Vps4bP46467 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC19.83■□□□□ 0.77
Vps4bP46467 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
Vps4bP46467 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Vps4bP46467 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC19.83■□□□□ 0.77
Vps4bP46467 Gm13241-201ENSMUST00000094493 780 ntBASIC19.83■□□□□ 0.77
Vps4bP46467 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC19.83■□□□□ 0.76
Vps4bP46467 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Vps4bP46467 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.76
Vps4bP46467 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC19.82■□□□□ 0.76
Vps4bP46467 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
Vps4bP46467 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Vps4bP46467 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
Vps4bP46467 Gm43759-201ENSMUST00000196925 1261 ntBASIC19.82■□□□□ 0.76
Vps4bP46467 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Vps4bP46467 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Vps4bP46467 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
Vps4bP46467 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Vps4bP46467 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
Vps4bP46467 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Vps4bP46467 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
Vps4bP46467 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
Vps4bP46467 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Vps4bP46467 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Vps4bP46467 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Vps4bP46467 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Vps4bP46467 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Vps4bP46467 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Vps4bP46467 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
Vps4bP46467 Gm27045-201ENSMUST00000182145 1402 ntBASIC19.8■□□□□ 0.76
Vps4bP46467 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Vps4bP46467 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC19.8■□□□□ 0.76
Vps4bP46467 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC19.8■□□□□ 0.76
Vps4bP46467 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
Vps4bP46467 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Vps4bP46467 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Vps4bP46467 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Vps4bP46467 Gm8770-201ENSMUST00000121113 1109 ntBASIC19.79■□□□□ 0.76
Vps4bP46467 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Vps4bP46467 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Vps4bP46467 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
Vps4bP46467 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
Vps4bP46467 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
Vps4bP46467 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
Vps4bP46467 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Vps4bP46467 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Vps4bP46467 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
Vps4bP46467 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Vps4bP46467 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC19.78■□□□□ 0.76
Vps4bP46467 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Retrieved 100 of 76,532 protein–RNA pairs in 34.1 ms