Protein–RNA interactions for Protein: P40240

Cd9, CD9 antigen, mousemouse

Predictions only

Length 226 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd9P40240 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Cd9P40240 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Cd9P40240 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
Cd9P40240 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Cd9P40240 Gm7160-202ENSMUST00000188519 1027 ntBASIC19.44■□□□□ 0.7
Cd9P40240 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC19.44■□□□□ 0.7
Cd9P40240 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Cd9P40240 Golph3-202ENSMUST00000226517 2359 ntBASIC19.44■□□□□ 0.7
Cd9P40240 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Cd9P40240 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Cd9P40240 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
Cd9P40240 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC19.43■□□□□ 0.7
Cd9P40240 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Cd9P40240 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC19.43■□□□□ 0.7
Cd9P40240 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Cd9P40240 Gm20100-201ENSMUST00000209418 2272 ntBASIC19.42■□□□□ 0.7
Cd9P40240 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
Cd9P40240 Hsf1-204ENSMUST00000226872 2104 ntBASIC19.42■□□□□ 0.7
Cd9P40240 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Cd9P40240 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Cd9P40240 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Cd9P40240 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC19.42■□□□□ 0.7
Cd9P40240 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
Cd9P40240 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Cd9P40240 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Cd9P40240 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Cd9P40240 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
Cd9P40240 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Cd9P40240 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Cd9P40240 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
Cd9P40240 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
Cd9P40240 Gm10616-201ENSMUST00000205285 2127 ntBASIC19.42■□□□□ 0.7
Cd9P40240 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Cd9P40240 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Cd9P40240 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Cd9P40240 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Cd9P40240 AC124392.1-201ENSMUST00000225172 5324 ntBASIC19.41■□□□□ 0.7
Cd9P40240 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
Cd9P40240 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Cd9P40240 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Cd9P40240 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC19.41■□□□□ 0.7
Cd9P40240 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC19.41■□□□□ 0.7
Cd9P40240 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Cd9P40240 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
Cd9P40240 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Cd9P40240 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC19.41■□□□□ 0.7
Cd9P40240 Gm43545-201ENSMUST00000196765 2779 ntBASIC19.41■□□□□ 0.7
Cd9P40240 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
Cd9P40240 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC19.4■□□□□ 0.7
Cd9P40240 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Cd9P40240 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Cd9P40240 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC19.4■□□□□ 0.7
Cd9P40240 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Cd9P40240 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
Cd9P40240 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Cd9P40240 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
Cd9P40240 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Cd9P40240 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
Cd9P40240 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Cd9P40240 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Cd9P40240 Gm12251-201ENSMUST00000117893 792 ntBASIC19.39■□□□□ 0.69
Cd9P40240 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Cd9P40240 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC19.39■□□□□ 0.69
Cd9P40240 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC19.39■□□□□ 0.69
Cd9P40240 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Cd9P40240 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Cd9P40240 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Cd9P40240 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Cd9P40240 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Cd9P40240 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Cd9P40240 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Cd9P40240 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Cd9P40240 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC19.38■□□□□ 0.69
Cd9P40240 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Cd9P40240 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Cd9P40240 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Cd9P40240 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Cd9P40240 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
Cd9P40240 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Cd9P40240 Gm42911-201ENSMUST00000199360 1630 ntBASIC19.37■□□□□ 0.69
Cd9P40240 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Cd9P40240 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Cd9P40240 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Cd9P40240 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
Cd9P40240 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Cd9P40240 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Cd9P40240 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
Cd9P40240 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
Cd9P40240 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
Cd9P40240 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Cd9P40240 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC19.36■□□□□ 0.69
Cd9P40240 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Cd9P40240 Gm12821-201ENSMUST00000120022 600 ntBASIC19.36■□□□□ 0.69
Cd9P40240 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Cd9P40240 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Cd9P40240 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Cd9P40240 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
Cd9P40240 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Cd9P40240 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
Cd9P40240 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 30.3 ms