Protein–RNA interactions for Protein: P39038

Cdh4, Cadherin-4, mousemouse

Predictions only

Length 913 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh4P39038 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
Cdh4P39038 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC18.75■□□□□ 0.59
Cdh4P39038 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Cdh4P39038 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Cdh4P39038 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Cdh4P39038 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Cdh4P39038 Gm43017-201ENSMUST00000198296 752 ntBASIC18.75■□□□□ 0.59
Cdh4P39038 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Cdh4P39038 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC18.75■□□□□ 0.59
Cdh4P39038 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC18.75■□□□□ 0.59
Cdh4P39038 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC18.74■□□□□ 0.59
Cdh4P39038 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Cdh4P39038 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Cdh4P39038 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC18.74■□□□□ 0.59
Cdh4P39038 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Cdh4P39038 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC18.74■□□□□ 0.59
Cdh4P39038 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC18.74■□□□□ 0.59
Cdh4P39038 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC18.74■□□□□ 0.59
Cdh4P39038 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Cdh4P39038 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Cdh4P39038 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Cdh4P39038 Gm15043-201ENSMUST00000118843 1543 ntBASIC18.74■□□□□ 0.59
Cdh4P39038 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
Cdh4P39038 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Cdh4P39038 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Cdh4P39038 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC18.73■□□□□ 0.59
Cdh4P39038 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Cdh4P39038 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Cdh4P39038 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Cdh4P39038 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
Cdh4P39038 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Cdh4P39038 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
Cdh4P39038 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
Cdh4P39038 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC18.73■□□□□ 0.59
Cdh4P39038 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC18.73■□□□□ 0.59
Cdh4P39038 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC18.73■□□□□ 0.59
Cdh4P39038 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Cdh4P39038 Serp2-204ENSMUST00000228055 705 ntBASIC18.73■□□□□ 0.59
Cdh4P39038 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
Cdh4P39038 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Cdh4P39038 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Cdh4P39038 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Cdh4P39038 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC18.73■□□□□ 0.59
Cdh4P39038 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Cdh4P39038 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Cdh4P39038 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Cdh4P39038 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Cdh4P39038 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Cdh4P39038 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC18.72■□□□□ 0.59
Cdh4P39038 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Cdh4P39038 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
Cdh4P39038 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Cdh4P39038 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
Cdh4P39038 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
Cdh4P39038 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
Cdh4P39038 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Cdh4P39038 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Cdh4P39038 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC18.71■□□□□ 0.59
Cdh4P39038 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC18.71■□□□□ 0.59
Cdh4P39038 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC18.71■□□□□ 0.59
Cdh4P39038 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Cdh4P39038 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
Cdh4P39038 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Cdh4P39038 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Cdh4P39038 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Cdh4P39038 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Cdh4P39038 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Cdh4P39038 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
Cdh4P39038 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Cdh4P39038 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
Cdh4P39038 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC18.7■□□□□ 0.58
Cdh4P39038 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Cdh4P39038 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Cdh4P39038 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC18.7■□□□□ 0.58
Cdh4P39038 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Cdh4P39038 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Cdh4P39038 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
Cdh4P39038 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC18.7■□□□□ 0.58
Cdh4P39038 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Cdh4P39038 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Cdh4P39038 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Cdh4P39038 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
Cdh4P39038 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Cdh4P39038 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Cdh4P39038 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
Cdh4P39038 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Cdh4P39038 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Cdh4P39038 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Cdh4P39038 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
Cdh4P39038 Smad6-203ENSMUST00000179458 273 ntBASIC18.69■□□□□ 0.58
Cdh4P39038 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC18.69■□□□□ 0.58
Cdh4P39038 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Cdh4P39038 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Cdh4P39038 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Cdh4P39038 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Cdh4P39038 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Cdh4P39038 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Cdh4P39038 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
Cdh4P39038 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
Cdh4P39038 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 189.1 ms