Protein–RNA interactions for Protein: P35441

Thbs1, Thrombospondin-1, mousemouse

Predictions only

Length 1,170 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Thbs1P35441 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Thbs1P35441 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Thbs1P35441 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC18.14■□□□□ 0.49
Thbs1P35441 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC18.14■□□□□ 0.49
Thbs1P35441 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Thbs1P35441 Gm9847-201ENSMUST00000052528 599 ntBASIC18.14■□□□□ 0.49
Thbs1P35441 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Thbs1P35441 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC18.14■□□□□ 0.49
Thbs1P35441 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC18.14■□□□□ 0.49
Thbs1P35441 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
Thbs1P35441 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Thbs1P35441 Gm21956-201ENSMUST00000179946 522 ntBASIC18.13■□□□□ 0.49
Thbs1P35441 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC18.13■□□□□ 0.49
Thbs1P35441 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Thbs1P35441 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC18.13■□□□□ 0.49
Thbs1P35441 Gm10616-201ENSMUST00000205285 2127 ntBASIC18.13■□□□□ 0.49
Thbs1P35441 Gm43545-201ENSMUST00000196765 2779 ntBASIC18.13■□□□□ 0.49
Thbs1P35441 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Thbs1P35441 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Thbs1P35441 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Thbs1P35441 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Thbs1P35441 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC18.12■□□□□ 0.49
Thbs1P35441 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC18.12■□□□□ 0.49
Thbs1P35441 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC18.12■□□□□ 0.49
Thbs1P35441 Gm43034-201ENSMUST00000198678 1364 ntBASIC18.12■□□□□ 0.49
Thbs1P35441 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC18.11■□□□□ 0.49
Thbs1P35441 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Thbs1P35441 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Thbs1P35441 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Thbs1P35441 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Thbs1P35441 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Thbs1P35441 AA386476-201ENSMUST00000098781 1665 ntBASIC18.11■□□□□ 0.49
Thbs1P35441 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Thbs1P35441 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
Thbs1P35441 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Thbs1P35441 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Thbs1P35441 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Thbs1P35441 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Thbs1P35441 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
Thbs1P35441 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
Thbs1P35441 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC18.1■□□□□ 0.49
Thbs1P35441 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
Thbs1P35441 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Thbs1P35441 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Thbs1P35441 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
Thbs1P35441 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Thbs1P35441 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
Thbs1P35441 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
Thbs1P35441 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
Thbs1P35441 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Thbs1P35441 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Thbs1P35441 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC18.09■□□□□ 0.49
Thbs1P35441 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Thbs1P35441 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC18.09■□□□□ 0.49
Thbs1P35441 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Thbs1P35441 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Thbs1P35441 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
Thbs1P35441 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Thbs1P35441 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
Thbs1P35441 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Thbs1P35441 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Thbs1P35441 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Thbs1P35441 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC18.09■□□□□ 0.49
Thbs1P35441 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
Thbs1P35441 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Thbs1P35441 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
Thbs1P35441 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Thbs1P35441 Hsf1-204ENSMUST00000226872 2104 ntBASIC18.08■□□□□ 0.49
Thbs1P35441 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Thbs1P35441 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Thbs1P35441 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC18.08■□□□□ 0.49
Thbs1P35441 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC18.08■□□□□ 0.49
Thbs1P35441 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Thbs1P35441 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Thbs1P35441 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.48
Thbs1P35441 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Thbs1P35441 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Thbs1P35441 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Thbs1P35441 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Thbs1P35441 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Thbs1P35441 Gm9207-201ENSMUST00000198773 1115 ntBASIC18.07■□□□□ 0.48
Thbs1P35441 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Thbs1P35441 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC18.06■□□□□ 0.48
Thbs1P35441 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Thbs1P35441 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Thbs1P35441 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Thbs1P35441 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Thbs1P35441 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Thbs1P35441 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Thbs1P35441 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Thbs1P35441 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC18.06■□□□□ 0.48
Thbs1P35441 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
Thbs1P35441 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
Thbs1P35441 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Thbs1P35441 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC18.06■□□□□ 0.48
Thbs1P35441 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Thbs1P35441 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC18.05■□□□□ 0.48
Thbs1P35441 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC18.05■□□□□ 0.48
Thbs1P35441 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC18.05■□□□□ 0.48
Thbs1P35441 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 22.4 ms