Protein–RNA interactions for Protein: P33435

Mmp13, Collagenase 3, mousemouse

Predictions only

Length 472 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp13P33435 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Mmp13P33435 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC20.06■□□□□ 0.8
Mmp13P33435 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Mmp13P33435 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
Mmp13P33435 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Mmp13P33435 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Mmp13P33435 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Mmp13P33435 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC20.06■□□□□ 0.8
Mmp13P33435 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Mmp13P33435 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
Mmp13P33435 Gm6802-201ENSMUST00000167843 1983 ntBASIC20.06■□□□□ 0.8
Mmp13P33435 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Mmp13P33435 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Mmp13P33435 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Mmp13P33435 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Mmp13P33435 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Mmp13P33435 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Mmp13P33435 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Mmp13P33435 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Mmp13P33435 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Mmp13P33435 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC20.04■□□□□ 0.8
Mmp13P33435 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Mmp13P33435 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC20.04■□□□□ 0.8
Mmp13P33435 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Mmp13P33435 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Mmp13P33435 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC20.04■□□□□ 0.8
Mmp13P33435 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Mmp13P33435 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Mmp13P33435 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Mmp13P33435 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Mmp13P33435 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Mmp13P33435 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Mmp13P33435 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Mmp13P33435 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Mmp13P33435 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC20.03■□□□□ 0.8
Mmp13P33435 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC20.03■□□□□ 0.8
Mmp13P33435 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Mmp13P33435 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
Mmp13P33435 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Mmp13P33435 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC20.02■□□□□ 0.8
Mmp13P33435 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC20.02■□□□□ 0.8
Mmp13P33435 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
Mmp13P33435 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
Mmp13P33435 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.79
Mmp13P33435 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.79
Mmp13P33435 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Mmp13P33435 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Mmp13P33435 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Mmp13P33435 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Mmp13P33435 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC20.01■□□□□ 0.79
Mmp13P33435 Golgb1-201ENSMUST00000023534 498 ntBASIC20.01■□□□□ 0.79
Mmp13P33435 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Mmp13P33435 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Mmp13P33435 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC20.01■□□□□ 0.79
Mmp13P33435 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC20.01■□□□□ 0.79
Mmp13P33435 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC20.01■□□□□ 0.79
Mmp13P33435 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Mmp13P33435 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Mmp13P33435 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC20■□□□□ 0.79
Mmp13P33435 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC20■□□□□ 0.79
Mmp13P33435 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC20■□□□□ 0.79
Mmp13P33435 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
Mmp13P33435 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Mmp13P33435 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
Mmp13P33435 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Mmp13P33435 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Mmp13P33435 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Mmp13P33435 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Mmp13P33435 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Mmp13P33435 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Mmp13P33435 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Mmp13P33435 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Mmp13P33435 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Mmp13P33435 AC140930.3-201ENSMUST00000222935 274 ntBASIC19.99■□□□□ 0.79
Mmp13P33435 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Mmp13P33435 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Mmp13P33435 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Mmp13P33435 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Mmp13P33435 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Mmp13P33435 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Mmp13P33435 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Mmp13P33435 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC19.98■□□□□ 0.79
Mmp13P33435 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Mmp13P33435 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Mmp13P33435 Cdkn3-203ENSMUST00000227149 1952 ntBASIC19.97■□□□□ 0.79
Mmp13P33435 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Mmp13P33435 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Mmp13P33435 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Mmp13P33435 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC19.97■□□□□ 0.79
Mmp13P33435 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Mmp13P33435 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC19.97■□□□□ 0.79
Mmp13P33435 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Mmp13P33435 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Mmp13P33435 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Mmp13P33435 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Mmp13P33435 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Mmp13P33435 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC19.96■□□□□ 0.79
Mmp13P33435 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC19.96■□□□□ 0.79
Mmp13P33435 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC19.96■□□□□ 0.79
Mmp13P33435 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC19.96■□□□□ 0.79
Retrieved 100 of 76,532 protein–RNA pairs in 18.5 ms