Protein–RNA interactions for Protein: P27512

Cd40, Tumor necrosis factor receptor superfamily member 5, mousemouse

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd40P27512 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.44
Cd40P27512 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Cd40P27512 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
Cd40P27512 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
Cd40P27512 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC17.82■□□□□ 0.44
Cd40P27512 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Cd40P27512 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Cd40P27512 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Cd40P27512 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Cd40P27512 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Cd40P27512 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
Cd40P27512 Gm34220-201ENSMUST00000223001 2709 ntBASIC17.82■□□□□ 0.44
Cd40P27512 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Cd40P27512 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC17.82■□□□□ 0.44
Cd40P27512 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Cd40P27512 Gm8493-201ENSMUST00000196881 489 ntBASIC17.82■□□□□ 0.44
Cd40P27512 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC17.82■□□□□ 0.44
Cd40P27512 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
Cd40P27512 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Cd40P27512 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Cd40P27512 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Cd40P27512 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC17.82■□□□□ 0.44
Cd40P27512 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
Cd40P27512 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Cd40P27512 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Cd40P27512 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Cd40P27512 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC17.81■□□□□ 0.44
Cd40P27512 Flvcr1-202ENSMUST00000191946 1216 ntBASIC17.81■□□□□ 0.44
Cd40P27512 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Cd40P27512 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Cd40P27512 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC17.81■□□□□ 0.44
Cd40P27512 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Cd40P27512 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Cd40P27512 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Cd40P27512 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC17.81■□□□□ 0.44
Cd40P27512 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
Cd40P27512 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC17.81■□□□□ 0.44
Cd40P27512 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Cd40P27512 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Cd40P27512 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC17.8■□□□□ 0.44
Cd40P27512 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC17.8■□□□□ 0.44
Cd40P27512 Gm43173-201ENSMUST00000202246 593 ntBASIC17.8■□□□□ 0.44
Cd40P27512 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Cd40P27512 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Cd40P27512 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC17.8■□□□□ 0.44
Cd40P27512 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Cd40P27512 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
Cd40P27512 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Cd40P27512 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Cd40P27512 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Cd40P27512 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
Cd40P27512 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Cd40P27512 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Cd40P27512 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Cd40P27512 Gm6139-201ENSMUST00000079261 882 ntBASIC17.79■□□□□ 0.44
Cd40P27512 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Cd40P27512 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Cd40P27512 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Cd40P27512 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Cd40P27512 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Cd40P27512 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Cd40P27512 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Cd40P27512 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Cd40P27512 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Cd40P27512 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC17.77■□□□□ 0.44
Cd40P27512 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Cd40P27512 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Cd40P27512 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Cd40P27512 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Cd40P27512 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Cd40P27512 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Cd40P27512 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Cd40P27512 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Cd40P27512 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Cd40P27512 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Cd40P27512 AC154266.1-201ENSMUST00000223190 503 ntBASIC17.76■□□□□ 0.43
Cd40P27512 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Cd40P27512 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC17.76■□□□□ 0.43
Cd40P27512 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Cd40P27512 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC17.75■□□□□ 0.43
Cd40P27512 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Cd40P27512 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Cd40P27512 Serp2-204ENSMUST00000228055 705 ntBASIC17.75■□□□□ 0.43
Cd40P27512 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Cd40P27512 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Cd40P27512 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC17.75■□□□□ 0.43
Cd40P27512 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Cd40P27512 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Cd40P27512 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Cd40P27512 AC165080.2-201ENSMUST00000217491 1530 ntBASIC17.74■□□□□ 0.43
Cd40P27512 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Cd40P27512 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC17.74■□□□□ 0.43
Cd40P27512 Smad6-203ENSMUST00000179458 273 ntBASIC17.74■□□□□ 0.43
Cd40P27512 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Cd40P27512 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Cd40P27512 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC17.74■□□□□ 0.43
Cd40P27512 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC17.74■□□□□ 0.43
Cd40P27512 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Cd40P27512 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Cd40P27512 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 16.3 ms