Protein–RNA interactions for Protein: P23611

Irf8, Interferon regulatory factor 8, mousemouse

Predictions only

Length 424 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Irf8P23611 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Irf8P23611 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Irf8P23611 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC21.29■■□□□ 1
Irf8P23611 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Irf8P23611 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC21.29■■□□□ 1
Irf8P23611 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC21.29■■□□□ 1
Irf8P23611 AC154266.1-201ENSMUST00000223190 503 ntBASIC21.29■■□□□ 1
Irf8P23611 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC21.29■■□□□ 1
Irf8P23611 AC165080.2-201ENSMUST00000217491 1530 ntBASIC21.29■■□□□ 1
Irf8P23611 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Irf8P23611 Smad6-203ENSMUST00000179458 273 ntBASIC21.28■■□□□ 1
Irf8P23611 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
Irf8P23611 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC21.27■■□□□ 1
Irf8P23611 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC21.27■■□□□ 1
Irf8P23611 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC21.27■■□□□ 1
Irf8P23611 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■□□□□ 0.99
Irf8P23611 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Irf8P23611 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Irf8P23611 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Irf8P23611 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Irf8P23611 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC21.26■□□□□ 0.99
Irf8P23611 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Irf8P23611 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC21.26■□□□□ 0.99
Irf8P23611 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Irf8P23611 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC21.25■□□□□ 0.99
Irf8P23611 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Irf8P23611 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Irf8P23611 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
Irf8P23611 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC21.25■□□□□ 0.99
Irf8P23611 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Irf8P23611 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Irf8P23611 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC21.25■□□□□ 0.99
Irf8P23611 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
Irf8P23611 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Irf8P23611 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC21.24■□□□□ 0.99
Irf8P23611 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC21.24■□□□□ 0.99
Irf8P23611 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Irf8P23611 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC21.24■□□□□ 0.99
Irf8P23611 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Irf8P23611 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC21.23■□□□□ 0.99
Irf8P23611 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC21.23■□□□□ 0.99
Irf8P23611 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Irf8P23611 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Irf8P23611 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Irf8P23611 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Irf8P23611 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Irf8P23611 Gm10571-201ENSMUST00000097869 1638 ntBASIC21.22■□□□□ 0.99
Irf8P23611 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Irf8P23611 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
Irf8P23611 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Irf8P23611 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC21.22■□□□□ 0.99
Irf8P23611 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
Irf8P23611 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Irf8P23611 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
Irf8P23611 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Irf8P23611 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC21.22■□□□□ 0.99
Irf8P23611 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Irf8P23611 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Irf8P23611 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Irf8P23611 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC21.21■□□□□ 0.99
Irf8P23611 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Irf8P23611 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Irf8P23611 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Irf8P23611 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Irf8P23611 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
Irf8P23611 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC21.21■□□□□ 0.99
Irf8P23611 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Irf8P23611 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC21.21■□□□□ 0.99
Irf8P23611 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC21.21■□□□□ 0.99
Irf8P23611 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Irf8P23611 Gm42911-201ENSMUST00000199360 1630 ntBASIC21.2■□□□□ 0.98
Irf8P23611 Gm43017-201ENSMUST00000198296 752 ntBASIC21.2■□□□□ 0.98
Irf8P23611 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Irf8P23611 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Irf8P23611 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Irf8P23611 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Irf8P23611 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
Irf8P23611 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
Irf8P23611 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Irf8P23611 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC21.19■□□□□ 0.98
Irf8P23611 AC137127.1-201ENSMUST00000213466 1078 ntBASIC21.19■□□□□ 0.98
Irf8P23611 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC21.19■□□□□ 0.98
Irf8P23611 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC21.19■□□□□ 0.98
Irf8P23611 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Irf8P23611 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC21.19■□□□□ 0.98
Irf8P23611 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Irf8P23611 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Irf8P23611 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Irf8P23611 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Irf8P23611 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Irf8P23611 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Irf8P23611 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC21.18■□□□□ 0.98
Irf8P23611 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Irf8P23611 Gm11421-201ENSMUST00000122124 294 ntBASIC21.18■□□□□ 0.98
Irf8P23611 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC21.18■□□□□ 0.98
Irf8P23611 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Irf8P23611 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
Irf8P23611 Gm26833-201ENSMUST00000180899 440 ntBASIC21.17■□□□□ 0.98
Irf8P23611 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC21.17■□□□□ 0.98
Irf8P23611 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
Retrieved 100 of 76,532 protein–RNA pairs in 33.3 ms