Protein–RNA interactions for Protein: P18181

Cd48, CD48 antigen, mousemouse

Predictions only

Length 240 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd48P18181 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Cd48P18181 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Cd48P18181 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC17.56■□□□□ 0.4
Cd48P18181 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Cd48P18181 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC17.56■□□□□ 0.4
Cd48P18181 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC17.56■□□□□ 0.4
Cd48P18181 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Cd48P18181 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Cd48P18181 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Cd48P18181 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Cd48P18181 Dapk1-207ENSMUST00000226059 5009 ntBASIC17.56■□□□□ 0.4
Cd48P18181 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Cd48P18181 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Cd48P18181 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC17.55■□□□□ 0.4
Cd48P18181 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
Cd48P18181 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Cd48P18181 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Cd48P18181 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
Cd48P18181 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC17.55■□□□□ 0.4
Cd48P18181 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Cd48P18181 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Cd48P18181 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Cd48P18181 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Cd48P18181 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Cd48P18181 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Cd48P18181 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
Cd48P18181 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Cd48P18181 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC17.55■□□□□ 0.4
Cd48P18181 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Cd48P18181 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Cd48P18181 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Cd48P18181 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Cd48P18181 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Cd48P18181 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
Cd48P18181 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Cd48P18181 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Cd48P18181 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Cd48P18181 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC17.54■□□□□ 0.4
Cd48P18181 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Cd48P18181 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Cd48P18181 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
Cd48P18181 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Cd48P18181 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Cd48P18181 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Cd48P18181 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Cd48P18181 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
Cd48P18181 Gm10657-201ENSMUST00000193528 1031 ntBASIC17.53■□□□□ 0.4
Cd48P18181 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
Cd48P18181 Hsf1-204ENSMUST00000226872 2104 ntBASIC17.53■□□□□ 0.4
Cd48P18181 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Cd48P18181 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC17.52■□□□□ 0.4
Cd48P18181 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Cd48P18181 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC17.52■□□□□ 0.4
Cd48P18181 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC17.52■□□□□ 0.4
Cd48P18181 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Cd48P18181 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Cd48P18181 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Cd48P18181 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Cd48P18181 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Cd48P18181 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Cd48P18181 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC17.51■□□□□ 0.39
Cd48P18181 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Cd48P18181 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Cd48P18181 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Cd48P18181 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
Cd48P18181 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Cd48P18181 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Cd48P18181 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Cd48P18181 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Cd48P18181 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Cd48P18181 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
Cd48P18181 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Cd48P18181 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Cd48P18181 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC17.5■□□□□ 0.39
Cd48P18181 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Cd48P18181 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Cd48P18181 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Cd48P18181 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Cd48P18181 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Cd48P18181 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
Cd48P18181 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Cd48P18181 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC17.49■□□□□ 0.39
Cd48P18181 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
Cd48P18181 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Cd48P18181 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC17.49■□□□□ 0.39
Cd48P18181 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
Cd48P18181 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
Cd48P18181 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Cd48P18181 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
Cd48P18181 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Cd48P18181 Gm43909-201ENSMUST00000203443 1876 ntBASIC17.48■□□□□ 0.39
Cd48P18181 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Cd48P18181 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC17.48■□□□□ 0.39
Cd48P18181 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
Cd48P18181 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Cd48P18181 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Cd48P18181 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Cd48P18181 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Cd48P18181 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Cd48P18181 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 15.7 ms