Protein–RNA interactions for Protein: P08228

Sod1, Superoxide dismutase [Cu-Zn], mousemouse

Known RBP Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sod1P08228 AC154266.1-201ENSMUST00000223190 503 ntBASIC18.66■□□□□ 0.58
Sod1P08228 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Sod1P08228 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Sod1P08228 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Sod1P08228 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC18.65■□□□□ 0.58
Sod1P08228 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
Sod1P08228 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC18.65■□□□□ 0.58
Sod1P08228 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Sod1P08228 Gm12504-201ENSMUST00000120860 2231 ntBASIC18.65■□□□□ 0.58
Sod1P08228 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Sod1P08228 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Sod1P08228 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Sod1P08228 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
Sod1P08228 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Sod1P08228 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Sod1P08228 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Sod1P08228 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Sod1P08228 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Sod1P08228 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Sod1P08228 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
Sod1P08228 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC18.64■□□□□ 0.58
Sod1P08228 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Sod1P08228 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Sod1P08228 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Sod1P08228 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC18.64■□□□□ 0.57
Sod1P08228 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC18.64■□□□□ 0.57
Sod1P08228 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC18.64■□□□□ 0.57
Sod1P08228 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
Sod1P08228 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Sod1P08228 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Sod1P08228 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Sod1P08228 AA386476-201ENSMUST00000098781 1665 ntBASIC18.63■□□□□ 0.57
Sod1P08228 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Sod1P08228 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Sod1P08228 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Sod1P08228 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Sod1P08228 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Sod1P08228 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC18.63■□□□□ 0.57
Sod1P08228 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
Sod1P08228 Gm4968-201ENSMUST00000071458 858 ntBASIC18.63■□□□□ 0.57
Sod1P08228 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
Sod1P08228 Gm15043-201ENSMUST00000118843 1543 ntBASIC18.63■□□□□ 0.57
Sod1P08228 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Sod1P08228 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Sod1P08228 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Sod1P08228 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Sod1P08228 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Sod1P08228 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
Sod1P08228 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Sod1P08228 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Sod1P08228 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Sod1P08228 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Sod1P08228 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Sod1P08228 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Sod1P08228 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Sod1P08228 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Sod1P08228 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Sod1P08228 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
Sod1P08228 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Sod1P08228 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC18.62■□□□□ 0.57
Sod1P08228 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC18.61■□□□□ 0.57
Sod1P08228 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC18.61■□□□□ 0.57
Sod1P08228 Gm13148-201ENSMUST00000118892 745 ntBASIC18.61■□□□□ 0.57
Sod1P08228 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
Sod1P08228 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Sod1P08228 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Sod1P08228 Cdkn3-203ENSMUST00000227149 1952 ntBASIC18.61■□□□□ 0.57
Sod1P08228 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Sod1P08228 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Sod1P08228 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
Sod1P08228 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Sod1P08228 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC18.6■□□□□ 0.57
Sod1P08228 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Sod1P08228 Gm13534-201ENSMUST00000121169 513 ntBASIC18.6■□□□□ 0.57
Sod1P08228 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Sod1P08228 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Sod1P08228 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Sod1P08228 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Sod1P08228 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Sod1P08228 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
Sod1P08228 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
Sod1P08228 Gm43909-201ENSMUST00000203443 1876 ntBASIC18.59■□□□□ 0.57
Sod1P08228 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Sod1P08228 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC18.59■□□□□ 0.57
Sod1P08228 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Sod1P08228 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Sod1P08228 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Sod1P08228 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Sod1P08228 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
Sod1P08228 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Sod1P08228 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC18.58■□□□□ 0.56
Sod1P08228 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Sod1P08228 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC18.58■□□□□ 0.56
Sod1P08228 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Sod1P08228 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Sod1P08228 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Sod1P08228 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Sod1P08228 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Sod1P08228 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Sod1P08228 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 21.7 ms