Protein–RNA interactions for Protein: P06328

Ig heavy chain V region VH558 B4, mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P06328 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC14.35□□□□□ -0.11
P06328 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
P06328 Etf1-202ENSMUST00000180351 108 ntBASIC14.35□□□□□ -0.11
P06328 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
P06328 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
P06328 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
P06328 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC14.35□□□□□ -0.11
P06328 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC14.35□□□□□ -0.11
P06328 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
P06328 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
P06328 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
P06328 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC14.35□□□□□ -0.11
P06328 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
P06328 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
P06328 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
P06328 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
P06328 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
P06328 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC14.34□□□□□ -0.11
P06328 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
P06328 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
P06328 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
P06328 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
P06328 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
P06328 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
P06328 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.11
P06328 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.11
P06328 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
P06328 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.11
P06328 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.11
P06328 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
P06328 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC14.33□□□□□ -0.12
P06328 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
P06328 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
P06328 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
P06328 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
P06328 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
P06328 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
P06328 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
P06328 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
P06328 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
P06328 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
P06328 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
P06328 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
P06328 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
P06328 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
P06328 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
P06328 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
P06328 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
P06328 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
P06328 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
P06328 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
P06328 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
P06328 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
P06328 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
P06328 Gm5812-201ENSMUST00000061073 957 ntBASIC14.31□□□□□ -0.12
P06328 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
P06328 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC14.31□□□□□ -0.12
P06328 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC14.31□□□□□ -0.12
P06328 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
P06328 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
P06328 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC14.31□□□□□ -0.12
P06328 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
P06328 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
P06328 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
P06328 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
P06328 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
P06328 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC14.3□□□□□ -0.12
P06328 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC14.3□□□□□ -0.12
P06328 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC14.3□□□□□ -0.12
P06328 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
P06328 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
P06328 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
P06328 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
P06328 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC14.3□□□□□ -0.12
P06328 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
P06328 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
P06328 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
P06328 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC14.3□□□□□ -0.12
P06328 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
P06328 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
P06328 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC14.3□□□□□ -0.12
P06328 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
P06328 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
P06328 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
P06328 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
P06328 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
P06328 Gm15546-201ENSMUST00000122095 826 ntBASIC14.29□□□□□ -0.12
P06328 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
P06328 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
P06328 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC14.29□□□□□ -0.12
P06328 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
P06328 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
P06328 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
P06328 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC14.29□□□□□ -0.12
P06328 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
P06328 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
P06328 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC14.29□□□□□ -0.12
P06328 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC14.28□□□□□ -0.12
P06328 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
P06328 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 17.9 ms