Protein–RNA interactions for Protein: P01758

Igh-VJ558, Ig heavy chain V region 108A, mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igh-VJ558P01758 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC17.04■□□□□ 0.32
Igh-VJ558P01758 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Igh-VJ558P01758 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Igh-VJ558P01758 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Igh-VJ558P01758 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Igh-VJ558P01758 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Igh-VJ558P01758 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
Igh-VJ558P01758 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Igh-VJ558P01758 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Igh-VJ558P01758 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
Igh-VJ558P01758 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Igh-VJ558P01758 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Igh-VJ558P01758 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Igh-VJ558P01758 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Igh-VJ558P01758 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC17.03■□□□□ 0.32
Igh-VJ558P01758 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Igh-VJ558P01758 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Igh-VJ558P01758 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Igh-VJ558P01758 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC17.03■□□□□ 0.32
Igh-VJ558P01758 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Igh-VJ558P01758 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC17.03■□□□□ 0.32
Igh-VJ558P01758 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Igh-VJ558P01758 Gm10616-201ENSMUST00000205285 2127 ntBASIC17.03■□□□□ 0.32
Igh-VJ558P01758 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Igh-VJ558P01758 Gm10209-201ENSMUST00000203397 1607 ntBASIC17.03■□□□□ 0.32
Igh-VJ558P01758 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Igh-VJ558P01758 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Igh-VJ558P01758 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Igh-VJ558P01758 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC17.02■□□□□ 0.32
Igh-VJ558P01758 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
Igh-VJ558P01758 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Igh-VJ558P01758 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
Igh-VJ558P01758 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC17.02■□□□□ 0.31
Igh-VJ558P01758 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.31
Igh-VJ558P01758 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC17.01■□□□□ 0.31
Igh-VJ558P01758 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Igh-VJ558P01758 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Igh-VJ558P01758 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Igh-VJ558P01758 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Igh-VJ558P01758 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC17.01■□□□□ 0.31
Igh-VJ558P01758 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC17.01■□□□□ 0.31
Igh-VJ558P01758 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Igh-VJ558P01758 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
Igh-VJ558P01758 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Igh-VJ558P01758 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Igh-VJ558P01758 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
Igh-VJ558P01758 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Igh-VJ558P01758 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC17■□□□□ 0.31
Igh-VJ558P01758 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC17■□□□□ 0.31
Igh-VJ558P01758 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC17■□□□□ 0.31
Igh-VJ558P01758 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Igh-VJ558P01758 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC17■□□□□ 0.31
Igh-VJ558P01758 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
Igh-VJ558P01758 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Igh-VJ558P01758 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC16.99■□□□□ 0.31
Igh-VJ558P01758 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Igh-VJ558P01758 Gm21956-201ENSMUST00000179946 522 ntBASIC16.99■□□□□ 0.31
Igh-VJ558P01758 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC16.99■□□□□ 0.31
Igh-VJ558P01758 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Igh-VJ558P01758 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
Igh-VJ558P01758 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Igh-VJ558P01758 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC16.98■□□□□ 0.31
Igh-VJ558P01758 Iqck-206ENSMUST00000208658 2891 ntBASIC16.98■□□□□ 0.31
Igh-VJ558P01758 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Igh-VJ558P01758 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Igh-VJ558P01758 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Igh-VJ558P01758 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Igh-VJ558P01758 AC154266.1-201ENSMUST00000223190 503 ntBASIC16.98■□□□□ 0.31
Igh-VJ558P01758 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC16.98■□□□□ 0.31
Igh-VJ558P01758 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
Igh-VJ558P01758 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Igh-VJ558P01758 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Igh-VJ558P01758 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Igh-VJ558P01758 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Igh-VJ558P01758 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Igh-VJ558P01758 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Igh-VJ558P01758 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
Igh-VJ558P01758 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
Igh-VJ558P01758 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC16.97■□□□□ 0.31
Igh-VJ558P01758 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Igh-VJ558P01758 Gm5576-201ENSMUST00000075809 1236 ntBASIC16.97■□□□□ 0.31
Igh-VJ558P01758 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Igh-VJ558P01758 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC16.97■□□□□ 0.31
Igh-VJ558P01758 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Igh-VJ558P01758 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Igh-VJ558P01758 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Igh-VJ558P01758 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC16.96■□□□□ 0.31
Igh-VJ558P01758 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Igh-VJ558P01758 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Igh-VJ558P01758 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Igh-VJ558P01758 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
Igh-VJ558P01758 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Igh-VJ558P01758 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC16.96■□□□□ 0.31
Igh-VJ558P01758 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Igh-VJ558P01758 Gm13241-201ENSMUST00000094493 780 ntBASIC16.96■□□□□ 0.31
Igh-VJ558P01758 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
Igh-VJ558P01758 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
Igh-VJ558P01758 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Igh-VJ558P01758 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC16.95■□□□□ 0.3
Igh-VJ558P01758 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 20.7 ms