Protein–RNA interactions for Protein: O88597

Becn1, Beclin-1, mousemouse

Predictions only

Length 448 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Becn1O88597 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
Becn1O88597 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC22.34■■□□□ 1.17
Becn1O88597 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Becn1O88597 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Becn1O88597 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Becn1O88597 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC22.34■■□□□ 1.17
Becn1O88597 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Becn1O88597 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC22.34■■□□□ 1.17
Becn1O88597 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Becn1O88597 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
Becn1O88597 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
Becn1O88597 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Becn1O88597 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC22.34■■□□□ 1.17
Becn1O88597 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC22.34■■□□□ 1.17
Becn1O88597 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC22.33■■□□□ 1.17
Becn1O88597 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC22.33■■□□□ 1.17
Becn1O88597 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
Becn1O88597 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC22.33■■□□□ 1.17
Becn1O88597 Gm43231-201ENSMUST00000202960 2258 ntBASIC22.33■■□□□ 1.17
Becn1O88597 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
Becn1O88597 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
Becn1O88597 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
Becn1O88597 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
Becn1O88597 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
Becn1O88597 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC22.33■■□□□ 1.17
Becn1O88597 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Becn1O88597 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC22.32■■□□□ 1.16
Becn1O88597 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Becn1O88597 Gm43566-201ENSMUST00000196851 808 ntBASIC22.32■■□□□ 1.16
Becn1O88597 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC22.32■■□□□ 1.16
Becn1O88597 Gm42900-201ENSMUST00000197184 2167 ntBASIC22.32■■□□□ 1.16
Becn1O88597 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC22.32■■□□□ 1.16
Becn1O88597 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Becn1O88597 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
Becn1O88597 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Becn1O88597 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC22.31■■□□□ 1.16
Becn1O88597 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC22.31■■□□□ 1.16
Becn1O88597 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Becn1O88597 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC22.31■■□□□ 1.16
Becn1O88597 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
Becn1O88597 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC22.31■■□□□ 1.16
Becn1O88597 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Becn1O88597 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Becn1O88597 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Becn1O88597 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC22.3■■□□□ 1.16
Becn1O88597 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
Becn1O88597 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Becn1O88597 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Becn1O88597 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC22.3■■□□□ 1.16
Becn1O88597 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
Becn1O88597 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC22.3■■□□□ 1.16
Becn1O88597 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC22.3■■□□□ 1.16
Becn1O88597 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC22.3■■□□□ 1.16
Becn1O88597 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
Becn1O88597 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Becn1O88597 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
Becn1O88597 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC22.3■■□□□ 1.16
Becn1O88597 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC22.29■■□□□ 1.16
Becn1O88597 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Becn1O88597 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC22.29■■□□□ 1.16
Becn1O88597 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Becn1O88597 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Becn1O88597 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC22.29■■□□□ 1.16
Becn1O88597 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC22.29■■□□□ 1.16
Becn1O88597 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC22.29■■□□□ 1.16
Becn1O88597 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Becn1O88597 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
Becn1O88597 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Becn1O88597 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Becn1O88597 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC22.28■■□□□ 1.16
Becn1O88597 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Becn1O88597 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC22.27■■□□□ 1.16
Becn1O88597 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC22.27■■□□□ 1.16
Becn1O88597 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Becn1O88597 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC22.27■■□□□ 1.16
Becn1O88597 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
Becn1O88597 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Becn1O88597 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
Becn1O88597 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Becn1O88597 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC22.27■■□□□ 1.16
Becn1O88597 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC22.27■■□□□ 1.16
Becn1O88597 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Becn1O88597 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC22.27■■□□□ 1.16
Becn1O88597 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Becn1O88597 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC22.27■■□□□ 1.16
Becn1O88597 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC22.27■■□□□ 1.16
Becn1O88597 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
Becn1O88597 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Becn1O88597 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Becn1O88597 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC22.27■■□□□ 1.15
Becn1O88597 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC22.27■■□□□ 1.15
Becn1O88597 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Becn1O88597 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC22.26■■□□□ 1.15
Becn1O88597 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Becn1O88597 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Becn1O88597 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
Becn1O88597 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC22.26■■□□□ 1.15
Becn1O88597 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
Becn1O88597 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC22.26■■□□□ 1.15
Becn1O88597 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Retrieved 100 of 76,532 protein–RNA pairs in 19.7 ms