Protein–RNA interactions for Protein: O88552

Cldn2, Claudin-2, mousemouse

Predictions only

Length 230 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn2O88552 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Cldn2O88552 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
Cldn2O88552 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC20.1■□□□□ 0.81
Cldn2O88552 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Cldn2O88552 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Cldn2O88552 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Cldn2O88552 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Cldn2O88552 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Cldn2O88552 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Cldn2O88552 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Cldn2O88552 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Cldn2O88552 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Cldn2O88552 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.81
Cldn2O88552 Gm7514-201ENSMUST00000209475 934 ntBASIC20.08■□□□□ 0.81
Cldn2O88552 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC20.08■□□□□ 0.8
Cldn2O88552 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Cldn2O88552 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC20.07■□□□□ 0.8
Cldn2O88552 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
Cldn2O88552 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC20.07■□□□□ 0.8
Cldn2O88552 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Cldn2O88552 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
Cldn2O88552 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Cldn2O88552 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Cldn2O88552 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Cldn2O88552 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Cldn2O88552 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Cldn2O88552 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Cldn2O88552 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Cldn2O88552 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Cldn2O88552 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
Cldn2O88552 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
Cldn2O88552 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
Cldn2O88552 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Cldn2O88552 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Cldn2O88552 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Cldn2O88552 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Cldn2O88552 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Cldn2O88552 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC20.05■□□□□ 0.8
Cldn2O88552 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Cldn2O88552 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Cldn2O88552 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
Cldn2O88552 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC20.05■□□□□ 0.8
Cldn2O88552 Snhg20-203ENSMUST00000182811 2153 ntBASIC20.05■□□□□ 0.8
Cldn2O88552 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC20.05■□□□□ 0.8
Cldn2O88552 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Cldn2O88552 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Cldn2O88552 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
Cldn2O88552 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Cldn2O88552 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Cldn2O88552 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Cldn2O88552 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Cldn2O88552 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Cldn2O88552 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC20.04■□□□□ 0.8
Cldn2O88552 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Cldn2O88552 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
Cldn2O88552 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Cldn2O88552 Gm42911-201ENSMUST00000199360 1630 ntBASIC20.04■□□□□ 0.8
Cldn2O88552 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Cldn2O88552 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Cldn2O88552 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Cldn2O88552 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Cldn2O88552 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
Cldn2O88552 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Cldn2O88552 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Cldn2O88552 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Cldn2O88552 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC20.03■□□□□ 0.8
Cldn2O88552 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC20.03■□□□□ 0.8
Cldn2O88552 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
Cldn2O88552 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Cldn2O88552 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
Cldn2O88552 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Cldn2O88552 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC20.03■□□□□ 0.8
Cldn2O88552 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Cldn2O88552 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Cldn2O88552 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Cldn2O88552 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Cldn2O88552 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC20.02■□□□□ 0.8
Cldn2O88552 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC20.02■□□□□ 0.8
Cldn2O88552 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC20.02■□□□□ 0.8
Cldn2O88552 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Cldn2O88552 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
Cldn2O88552 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Cldn2O88552 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC20.02■□□□□ 0.8
Cldn2O88552 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC20.02■□□□□ 0.8
Cldn2O88552 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC20.02■□□□□ 0.8
Cldn2O88552 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Cldn2O88552 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Cldn2O88552 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
Cldn2O88552 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Cldn2O88552 Gm37035-201ENSMUST00000194809 2148 ntBASIC20.02■□□□□ 0.79
Cldn2O88552 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
Cldn2O88552 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Cldn2O88552 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Cldn2O88552 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Cldn2O88552 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC20.01■□□□□ 0.79
Cldn2O88552 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC20.01■□□□□ 0.79
Cldn2O88552 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Cldn2O88552 CT030146.1-201ENSMUST00000220919 217 ntBASIC20.01■□□□□ 0.79
Cldn2O88552 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Cldn2O88552 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
Retrieved 100 of 76,532 protein–RNA pairs in 25.8 ms